1P5S

STRUCTURE AND FUNCTION OF THE CALPONIN-HOMOLOGY DOMAIN OF AN IQGAP PROTEIN FROM SCHIZOSACCHAROMYCES POMBE


X-RAY DIFFRACTION

Crystallization

Crystal Properties
Matthews coefficientSolvent content
1.831.06

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 30.884α = 90
b = 68.666β = 102.51
c = 35.309γ = 90
Symmetry
Space GroupP 1 21 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDMARRESEARCHMIRRORS2002-09-15MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONESRF BEAMLINE BM141.653ESRFBM14

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
12.2120.697.416.456890689033
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
2.212.2981.58.72570

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Cut-off Sigma (I)Cut-off Sigma (F)Number Reflections (All)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (All)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONSulfur SADTHROUGHOUT2.2221336890657131995.910.199210.199210.197090.246RANDOM19.802
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-0.070.31-0.210.42
RMS Deviations
KeyRefinement Restraint Deviation
r_scangle_it5.881
r_scbond_it4.052
r_mcangle_it3.663
r_mcbond_it2.573
r_dihedral_angle_1_deg1.742
r_angle_refined_deg1.107
r_nbd_refined0.351
r_symmetry_vdw_refined0.222
r_symmetry_hbond_refined0.18
r_xyhbond_nbd_refined0.173
RMS Deviations
KeyRefinement Restraint Deviation
r_scangle_it5.881
r_scbond_it4.052
r_mcangle_it3.663
r_mcbond_it2.573
r_dihedral_angle_1_deg1.742
r_angle_refined_deg1.107
r_nbd_refined0.351
r_symmetry_vdw_refined0.222
r_symmetry_hbond_refined0.18
r_xyhbond_nbd_refined0.173
r_chiral_restr0.081
r_gen_planes_other0.013
r_bond_refined_d0.006
r_gen_planes_refined0.005
r_bond_other_d
r_angle_other_deg
r_dihedral_angle_2_deg
r_nbd_other
r_nbtor_other
r_xyhbond_nbd_other
r_symmetry_vdw_other
r_symmetry_hbond_other
r_rigid_bond_restr
r_sphericity_free
r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms1303
Nucleic Acid Atoms
Solvent Atoms145
Heterogen Atoms4

Software

Software
Software NamePurpose
REFMACrefinement
DENZOdata reduction
SCALEPACKdata scaling
SHARPphasing