1P1A

NMR structure of ubiquitin-like domain of hHR23B


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
1CBCACONH, HNCACB, CCC-TOC-NNH, HCC-TOC-NNH, HNCO2mM UbL domain 15N,13C; 50mM Sodium Phosphate Buffer with 100mM NaCl92.5% H2O, 7.5% D2O50mM sodium phosphate + 100mM sodium chloride6.0ambient303
23D_15N-separated_TOCSY, Intensity-modulated 15N HSQC2mM UbL domain 15N; 50mM Sodium Phosphate Buffer with 100mM NaCl92.5% H2O, 7.5% D2O50mM sodium phosphate + 100mM sodium chloride6.0ambient303
32D NOESY2mM UbL domain non-labeled; 50mM Sodium Phosphate Buffer with 100mM NaCl100% D2O50mM sodium phosphate + 100mM sodium chloride6.0ambient303
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1VarianINOVA600
NMR Refinement
MethodDetailsSoftware
Cyana-Automated NOE assignment, Torsion angle dynamics; Amber-Simulated annealing, Cyana output is the initial structureCYANA
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number60
Conformers Submitted Total Number14
Representative Model1 (closest to the average)
Additional NMR Experimental Information
DetailsDistance Restraints From 2D D2O-NOESY, 3D 15N-NOESY-HSQC, Angle Restaints From Intensity-modulated 15N HSQC and Talos Chemical shift analysis
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1structure solutionCYANA1.0.6
2refinementAmber7