X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, HANGING DROP7.5298Peg 400, TRIS-HCl, pH 7.50, VAPOR DIFFUSION, HANGING DROP, temperature 298K
Crystal Properties
Matthews coefficientSolvent content
2.0339.74

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 36.92α = 90
b = 80.05β = 90
c = 96.62γ = 90
Symmetry
Space GroupP 21 21 21

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100IMAGE PLATEMARRESEARCHMIRROR2002-09-30M1.200
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONELETTRA BEAMLINE 5.2R1.2000ELETTRA5.2R

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)R Sym I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
12.933.396.80.1090.10911.25.7649268
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)R-Sym I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
12.93.06890.5730.5733.15.4

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONUNCONVENTIANAL METHOD USING THE GROUP-SUBGROUP RELATIONTHROUGHOUT2.915649230996.30.269430.266950.31979RANDOM61.7
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-3.24-10.313.54
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg25.086
r_scangle_it10.53
r_dihedral_angle_1_deg7.507
r_scbond_it6.679
r_mcangle_it4.087
r_angle_refined_deg2.502
r_mcbond_it2.169
r_symmetry_hbond_refined0.395
r_nbd_refined0.354
r_symmetry_vdw_refined0.337
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg25.086
r_scangle_it10.53
r_dihedral_angle_1_deg7.507
r_scbond_it6.679
r_mcangle_it4.087
r_angle_refined_deg2.502
r_mcbond_it2.169
r_symmetry_hbond_refined0.395
r_nbd_refined0.354
r_symmetry_vdw_refined0.337
r_xyhbond_nbd_refined0.25
r_chiral_restr0.156
r_bond_refined_d0.028
r_gen_planes_refined0.006
r_bond_other_d
r_angle_other_deg
r_gen_planes_other
r_nbd_other
r_nbtor_other
r_xyhbond_nbd_other
r_symmetry_vdw_other
r_symmetry_hbond_other
r_rigid_bond_restr
r_sphericity_free
r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms2478
Nucleic Acid Atoms
Solvent Atoms7
Heterogen Atoms7

Software

Software
Software NamePurpose
MOSFLMdata reduction
SCALAdata scaling
REFMACrefinement
CCP4data scaling