1OT4
Solution structure of Cu(II)-CopC from Pseudomonas syringae
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 2D NOESY | 2.5 mM Cu(II)-CopC 15N,13C; 100mM phosphate buffer NA; 90% H2O, 10% D2O | 90% H2O/10% D2O | 100mM phosphate | 7.0 | ambient | 298 | |
2 | 3D_13C-separated_NOESY | 2.5 mM Cu(II)-CopC 15N,13C; 100mM phosphate buffer NA; 90% H2O, 10% D2O | 90% H2O/10% D2O | 100mM phosphate | 7.0 | ambient | 298 | |
3 | 3D_15N-separated_NOESY | 2.5 mM Cu(II)-CopC 15N,13C; 100mM phosphate buffer NA; 90% H2O, 10% D2O | 90% H2O/10% D2O | 100mM phosphate | 7.0 | ambient | 298 | |
4 | 13C-13C constant time-COSY | 2.5 mM Cu(II)-CopC 15N,13C; 100mM phosphate buffer NA; 90% H2O, 10% D2O | 90% H2O/10% D2O | 100mM phosphate | 7.0 | ambient | 298 | |
5 | 13C -15N HSQC | 2.5 mM Cu(II)-CopC 15N,13C; 100mM phosphate buffer NA; 90% H2O, 10% D2O | 90% H2O/10% D2O | 100mM phosphate | 7.0 | ambient | 298 | |
6 | Saturation Recovery 1D 13C | 2.5 mM Cu(II)-CopC 15N,13C; 100mM phosphate buffer NA; 90% H2O, 10% D2O | 90% H2O/10% D2O | 100mM phosphate | 7.0 | ambient | 298 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | AVANCE | 700 |
NMR Refinement | ||
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Method | Details | Software |
simulated annealing torsion angle dynamics | 1276 meaningful NOEs, 123 dihedral angle restraints, 27 experimental hydrogen bonds, 23 metal-heteronucleus distances obtained from longitudinal 13C relaxation rates, 83 proton pseudocontact shifts | XwinNMR |
NMR Ensemble Information | |
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Conformer Selection Criteria | target function |
Conformers Calculated Total Number | 400 |
Conformers Submitted Total Number | 35 |
Additional NMR Experimental Information | |
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Details | Cu(II)-CopC was obtained by adding one equivalent of CuSO4 to apoCopC |
Computation: NMR Software | ||||
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# | Classification | Version | Software Name | Author |
1 | processing | XwinNMR | ||
2 | data analysis | XEASY | Eccles, Guentert, Billeter, Wuethrich | |
3 | structure solution | DYANA | Guentert, Mumenthaler, Wuethrich | |
4 | iterative matrix relaxation | CORMA | Borgias, Thomas, James | |
5 | refinement | DYANA | Guentert, Mumenthaler, Wuethrich |