1OPP

PEPTIDE OF HUMAN APOLIPOPROTEIN C-I RESIDUES 1-38, NMR, 28 STRUCTURES


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D-NOESY5 mM apoC, 300 mM SDS-d2s90% H2O/10% D2O4.8310
22D-TOCSY5 mM apoC, 300 mM SDS-d2s90% H2O/10% D2O4.8310
3DQF-COSY5 mM apoC, 300 mM SDS-d2s99.9% D2O4.8310
42D-NOESY5 mM apoC, 300 mM SDS-d2s99.9% D2O4.8310
52D-NOESY5 mM apoC, 50 mM potassium chloride, 20 mM potassium phosphate50% (v/v) TFE-d, 10% D2O4.8310
62D-TOCSY5 mM apoC, 50 mM potassium chloride, 20 mM potassium phosphate50% (v/v) TFE-d, 10% D2O4.8310
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAMX 600600
NMR Refinement
MethodDetailsSoftware
DISTANCE GEOMETRY/ SIMULATED ANNEALINGTHE STRUCTURE OF APOC-I(1-38) IN THE PRESENCE OF SODIUM DODECYL SULFATE WAS REFINED USING 464 NOE-BASED DISTANCE RESTRAINTS. NO DIHEDRAL RESTRAINTS WERE USED. THIS ENTRY CONTAINS ALL 28 ACCEPTED STRUCTURES. STRUCTURE CALCULATIONS WERE PERFORMED WITH THE PROGRAM DGII (BIOSYM/MSI, SAN DIEGO, CA) INCLUDING DISTANCE GEOMETRY CALCULATIONS, SIMULATED ANNEALING AND ENERGY MINIMIZATION WITH A CONJUGATED GRADIENT. THE CVFF FORCE FIELD WAS USED. FOR DETAILS ON STRUCTURE CALCULATION AND RMSDS PLEASE SEE REFERENCE CITED ON JRNL RECORDS ABOVE.DGII
NMR Ensemble Information
Conformer Selection Criteriastructures with the least restraint violations
Conformers Calculated Total Number30
Conformers Submitted Total Number28
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1refinementDGIIHAVEL
2structure solutionDGIIHAVEL