X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
15.7pH 5.70
Crystal Properties
Matthews coefficientSolvent content
2.4149.04

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 68.597α = 90
b = 225.045β = 108.39
c = 70.349γ = 90
Symmetry
Space GroupP 1 21 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100IMAGE PLATEMSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONESRFESRF

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
1328.290.80.0855.12.239236
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
12.32.42930.23.252.04

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodStarting modelResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUTPDB ENTRY 1GTX2.33076236401889.80.1880.221RANDOM18.17
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-2.77-0.711.11.23
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_3_deg17.888
r_dihedral_angle_1_deg3.704
r_scangle_it2.31
r_scbond_it1.312
r_angle_refined_deg1.296
r_mcangle_it0.82
r_angle_other_deg0.743
r_symmetry_hbond_refined0.455
r_mcbond_it0.405
r_symmetry_vdw_refined0.313
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_3_deg17.888
r_dihedral_angle_1_deg3.704
r_scangle_it2.31
r_scbond_it1.312
r_angle_refined_deg1.296
r_mcangle_it0.82
r_angle_other_deg0.743
r_symmetry_hbond_refined0.455
r_mcbond_it0.405
r_symmetry_vdw_refined0.313
r_symmetry_vdw_other0.3
r_symmetry_hbond_other0.275
r_nbd_refined0.231
r_nbd_other0.204
r_xyhbond_nbd_refined0.159
r_xyhbond_nbd_other0.143
r_chiral_restr0.079
r_bond_refined_d0.011
r_gen_planes_refined0.004
r_gen_planes_other0.004
r_bond_other_d0.001
r_dihedral_angle_2_deg
r_dihedral_angle_4_deg
r_nbtor_refined
r_nbtor_other
r_metal_ion_refined
r_metal_ion_other
r_symmetry_metal_ion_refined
r_symmetry_metal_ion_other
r_mcbond_other
r_mcangle_other
r_scbond_other
r_scangle_other
r_long_range_B_refined
r_long_range_B_other
r_rigid_bond_restr
r_sphericity_free
r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms14363
Nucleic Acid Atoms
Solvent Atoms633
Heterogen Atoms84

Software

Software
Software NamePurpose
REFMACrefinement
MOSFLMdata reduction
SCALAdata scaling
CCP4phasing