X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, SITTING DROP429340%v/v PEG 300, 100mM Phosphate Citrate, pH 4.0, VAPOR DIFFUSION, SITTING DROP, temperature 293K
Crystal Properties
Matthews coefficientSolvent content
2.5451.22

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 79.673α = 90
b = 92.829β = 90
c = 36.789γ = 90
Symmetry
Space GroupC 2 2 21

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDMARRESEARCH2002-09-29MSAD using Sulphur and Xenon
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONELETTRA BEAMLINE 5.2R1.8ELETTRA5.2R

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Sym I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
12.3430.8698.960.05211.653982239.55
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R-Sym I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
12.3422.40297.30.1165.1

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Cut-off Sigma (I)Cut-off Sigma (F)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONSAD Xenon/SulphurTHROUGHOUT2.3430.8622539857998.960.216140.21410.23556RANDOM39.556
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
2.61-1.28-1.33
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_1_deg6.476
r_scangle_it5.368
r_angle_other_deg3.788
r_scbond_it2.928
r_mcangle_it1.972
r_angle_refined_deg1.838
r_mcbond_it1.058
r_xyhbond_nbd_refined0.331
r_symmetry_vdw_other0.303
r_nbd_other0.279
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_1_deg6.476
r_scangle_it5.368
r_angle_other_deg3.788
r_scbond_it2.928
r_mcangle_it1.972
r_angle_refined_deg1.838
r_mcbond_it1.058
r_xyhbond_nbd_refined0.331
r_symmetry_vdw_other0.303
r_nbd_other0.279
r_symmetry_hbond_refined0.235
r_nbd_refined0.222
r_symmetry_vdw_refined0.216
r_chiral_restr0.112
r_nbtor_other0.11
r_bond_refined_d0.022
r_gen_planes_other0.013
r_gen_planes_refined0.011
r_bond_other_d
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms922
Nucleic Acid Atoms
Solvent Atoms30
Heterogen Atoms1

Software

Software
Software NamePurpose
REFMACrefinement
MOSFLMdata reduction
CCP4data scaling
SHARPphasing