X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, SITTING DROP5290sodium citrate, ammonium sulphate, pH 5., VAPOR DIFFUSION, SITTING DROP, temperature 290K
Crystal Properties
Matthews coefficientSolvent content
4.4472.1

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 88.9α = 90
b = 91.3β = 90
c = 48.4γ = 90
Symmetry
Space GroupP 21 21 21

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100IMAGE PLATEMARRESEARCH2000-05-05MMAD
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONESRF BEAMLINE BM30A0.9795ESRFBM30A

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)R Sym I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
12.420930.0540.05413.35.716103916103957.01
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)R-Sym I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
12.42.46810.2620.2622.7

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (All)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (All)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMADTHROUGHOUT2.415145481454875296.560.205650.205650.20430.23227RANDOM36.488
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-3.26-5.498.76
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_3_deg17.338
r_scangle_it4.624
r_dihedral_angle_1_deg3.511
r_scbond_it3.001
r_angle_refined_deg1.603
r_mcangle_it1.412
r_mcbond_it0.739
r_nbd_refined0.239
r_xyhbond_nbd_refined0.157
r_symmetry_vdw_refined0.11
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_3_deg17.338
r_scangle_it4.624
r_dihedral_angle_1_deg3.511
r_scbond_it3.001
r_angle_refined_deg1.603
r_mcangle_it1.412
r_mcbond_it0.739
r_nbd_refined0.239
r_xyhbond_nbd_refined0.157
r_symmetry_vdw_refined0.11
r_chiral_restr0.101
r_symmetry_hbond_refined0.077
r_bond_refined_d0.017
r_gen_planes_refined0.007
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms1538
Nucleic Acid Atoms
Solvent Atoms41
Heterogen Atoms

Software

Software
Software NamePurpose
DENZOdata reduction
SCALEPACKdata scaling
SOLVEphasing
REFMACrefinement