1NFP

STRUCTURAL REFINEMENT OF THE NON-FLUORESCENT FLAVOPROTEIN FROM PHOTOBACTERIUM LEIOGNATHI AT 1.60 ANGSTROMS RESOLUTION


X-RAY DIFFRACTION

Crystallization

Crystal Properties
Matthews coefficientSolvent content
2.4750.3

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 56.93α = 90
b = 92.23β = 90
c = 99.23γ = 90
Symmetry
Space GroupC 2 2 21

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-rayIMAGE PLATEFUJI1992-11-26
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONPHOTON FACTORY BEAMLINE BL-6A1.00Photon FactoryBL-6A

Data Collection

Refinement

Statistics
Diffraction IDStructure Solution MethodResolution (High)Resolution (Low)Cut-off Sigma (F)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeMean Isotropic B
X-RAY DIFFRACTION1.61012745178.70.175
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
RMS Deviations
KeyRefinement Restraint Deviation
p_orthonormal_tor24.3
p_staggered_tor18.1
p_scangle_it5.56
p_planar_tor4
p_scbond_it3.53
p_mcangle_it3.1
p_mcbond_it2.05
p_singtor_nbd0.253
p_xhyhbond_nbd0.206
p_chiral_restr0.194
RMS Deviations
KeyRefinement Restraint Deviation
p_orthonormal_tor24.3
p_staggered_tor18.1
p_scangle_it5.56
p_planar_tor4
p_scbond_it3.53
p_mcangle_it3.1
p_mcbond_it2.05
p_singtor_nbd0.253
p_xhyhbond_nbd0.206
p_chiral_restr0.194
p_multtor_nbd0.172
p_planar_d0.038
p_angle_d0.036
p_bond_d0.015
p_plane_restr0.014
p_angle_deg
p_hb_or_metal_coord
p_xyhbond_nbd
p_transverse_tor
p_special_tor
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms1848
Nucleic Acid Atoms
Solvent Atoms192
Heterogen Atoms99

Software

Software
Software NamePurpose
PROLSQrefinement
WEISdata reduction