1NA3

Design of Stable alpha-Helical Arrays from an Idealized TPR Motif


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, HANGING DROP8277Tris, PEG 4000, MgCl2, IPTG, NaCl, pH 8., VAPOR DIFFUSION, HANGING DROP at 277K
Crystal Properties
Matthews coefficientSolvent content
238.41

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 44.986α = 90
b = 54.941β = 90
c = 66.938γ = 90
Symmetry
Space GroupP 21 21 21

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDADSC QUANTUM 315MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONNSLS BEAMLINE X251.100NSLSX25

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)R Sym I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.5534.799.90.0420.04243.36.622285-3
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)R-Sym I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
1.551.611000.860.862.5

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUT1.5534.712228523961000.181020.178150.20731RANDOM12.877
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
0.580.31-0.89
RMS Deviations
KeyRefinement Restraint Deviation
r_scangle_it4.872
r_dihedral_angle_1_deg4.712
r_scbond_it3.055
r_mcangle_it1.7
r_angle_refined_deg1.511
r_mcbond_it0.903
r_angle_other_deg0.881
r_symmetry_vdw_other0.28
r_nbd_other0.238
r_nbd_refined0.229
RMS Deviations
KeyRefinement Restraint Deviation
r_scangle_it4.872
r_dihedral_angle_1_deg4.712
r_scbond_it3.055
r_mcangle_it1.7
r_angle_refined_deg1.511
r_mcbond_it0.903
r_angle_other_deg0.881
r_symmetry_vdw_other0.28
r_nbd_other0.238
r_nbd_refined0.229
r_xyhbond_nbd_refined0.195
r_symmetry_vdw_refined0.171
r_chiral_restr0.122
r_symmetry_hbond_refined0.095
r_nbtor_other0.089
r_bond_refined_d0.017
r_gen_planes_refined0.011
r_bond_other_d0.002
r_gen_planes_other0.001
r_dihedral_angle_2_deg
r_xyhbond_nbd_other
r_symmetry_hbond_other
r_rigid_bond_restr
r_sphericity_free
r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms1402
Nucleic Acid Atoms
Solvent Atoms90
Heterogen Atoms30

Software

Software
Software NamePurpose
HKL-2000data collection
SCALEPACKdata scaling
AMoREphasing
REFMACrefinement
HKL-2000data reduction