1MWB
Solution structure of the recombinant hemoglobin from the cyanobacterium Synechocystis sp. PCC 6803 in its hemichrome state
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 2D NOESY | 0.6 - 2 mM protein, 20 mM K or Na phosphate | 90% H2O/10% D2O | 50 mM | 7.5 | ambient | 298 | |
2 | 3D_13C-separated_NOESY | 1 mM U-15N, 13C protein, 20 mM K or Na phosphate | 90% H2O/10% D2O | 50 mM | 7.5 | ambient | 298 | |
3 | 3D_15N-separated_NOESY | 1 mM U-15N protein, 20 mM K or Na phosphate | 90% H2O/10% D2O | 50 mM | 7.5 | ambient | 298 | |
4 | J-modulated 1H-15N HSQC | 1 mM U-15N protein, 20 mM K or Na phosphate | 90% H2O/10% D2O | 50 mM | 7.5 | ambient | 298 | |
5 | 2D TOCSY | 0.6 - 2 mM protein, 20 mM K or Na phosphate | 100% D2O | 50 mM | 7.5 | ambient | 298 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | DRX | 600 |
2 | Varian | INOVA | 800 |
NMR Refinement | ||
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Method | Details | Software |
distance geometry, simulated annealing, molecular dynamics, torsional angle database | X-PLOR |
NMR Ensemble Information | |
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Conformer Selection Criteria | structures with lowest energy and least restraint violations |
Conformers Calculated Total Number | 100 |
Conformers Submitted Total Number | 20 |
Representative Model | 1 (lowest energy and fewest violations) |
Additional NMR Experimental Information | |
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Details | This is a low-spin Fe(+3) complex. Standard methods as applied to dimagnetic proteins were used to determine the structure. |
Computation: NMR Software | ||||
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# | Classification | Version | Software Name | Author |
1 | structure solution | X-PLOR | 3.851 | Brunger |
2 | data analysis | FELIX | 2000 | Accelrys |
3 | collection | XWINNMR | 2.5 | Bruker |
4 | processing | NMRPipe | 2.1 | Delaglio |
5 | refinement | X-PLOR-NIH | 1.2.1 | Brunger |