1MPE

Ensemble of 20 structures of the tetrameric mutant of the B1 domain of streptococcal protein G


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
13D_15N-separated_NOESY2.89 mM (in monomer) U-15N, 50 mM sodium phosphate buffer, 0.02% sodium azide90% H2O/10% D2O50 mM sodium phosphate, 0.02% sodium azide5.451 atm313
2HNHA2.89 mM (in monomer) U-15N, 50 mM sodium phosphate buffer, 0.02% sodium azide90% H2O/10% D2O50 mM sodium phosphate, 0.02% sodium azide5.451 atm313
33D_13C-separated_NOESY3.5 mM (in monomer) U-15N,13C, 50 mM sodium phosphate buffer, 0.02% sodium azide90% H2O/10% D2O50 mM sodium phosphate, 0.02% sodium azide5.451 atm313
44D_13C-separated_NOESY3.5 mM (in monomer) U-15N,13C, 50 mM sodium phosphate buffer, 0.02% sodium azide100% D2O50 mM sodium phosphate, 0.02% sodium azide5.451 atm313
54D_13C/15N-separated_NOESY3.5 mM (in monomer) U-15N,13C, 50 mM sodium phosphate buffer, 0.02% sodium azide90% H2O/10% D2O50 mM sodium phosphate, 0.02% sodium azide5.451 atm313
63D_12C-filtered_13C-separated_NOESY1.4 mM (in monomer) 1:1 mixture unlabelled:U-15N,13C, 50 mM sodium phosphate buffer, 0.02% sodium azide100% D2O50 mM sodium phosphate, 0.02% sodium azide5.451 atm313
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerDRX800
2BrukerDMX750
3BrukerDMX600
4BrukerDMX500
NMR Refinement
MethodDetailsSoftware
simulated annealingNMR constraints (per monomer) 822 NOE-derived distance restraints (534 intramonomer, 288 intermonomer) 42 distance restraints from hydrogen bonds (20 intramonomer, 22 intermonomer) 30 J-coupling restraints, 33 Residual dipolar couplings (HN) 66 backbone dihedral angle restraints 31 sidechain dihedral angle restraintsNMRPipe
NMR Ensemble Information
Conformer Selection Criteriastructures with least restraint violations and phi, psi angles of residue 46 in allowed region of Ramachrandran plot
Conformers Calculated Total Number100
Conformers Submitted Total Number21
Representative Model1 (minimized average structure)
Additional NMR Experimental Information
DetailsT1,T2, and heteronuclear NOEs collected. Dipolar couplings (N-H) were collected as well. Dipolar coupling and chemical shifts from residues with heteronuclear NOE below 0.6 were not used.
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1processingNMRPipe2.2Frank Delaglio
2data analysisPIPP4.3.2Dan Garrett
3collectionXwinNMR2.6Bruker Corp.
4refinementX-PLOR4.0Brunger
5structure solutionCNS1.0Brunger