1LR9

STRUCTURE OF Fs1, THE HEPARIN-BINDING DOMAIN OF FOLLISTATIN


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, HANGING DROP8.528930-35% PEG4000, 0.4 M Magnesium chloride, 0.1 M Tris-HCl, pH 8.5, VAPOR DIFFUSION, HANGING DROP, temperature 289K
Crystal Properties
Matthews coefficientSolvent content
2.3543.68

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 21.551α = 90
b = 43.733β = 90
c = 77.376γ = 90
Symmetry
Space GroupP 21 21 21

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDADSC QUANTUM 4Mirrors2001-02-11MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONESRF BEAMLINE ID14-40.9795ESRFID14-4

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
12.538.698.20.17.8278733.26
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
2.52.5990.40.171

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodStarting modelResolution (High)Resolution (Low)Number Reflections (All)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (All)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUTPDB ENTRY 1LR72.538.632766276612698.260.221510.221510.219720.2579RANDOM24.605
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-1.992.76-0.77
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg20.408
r_scangle_it4.759
r_scbond_it2.805
r_dihedral_angle_1_deg2.791
r_angle_refined_deg1.698
r_mcangle_it1.686
r_angle_other_deg0.989
r_mcbond_it0.867
r_xyhbond_nbd_refined0.495
r_xyhbond_nbd_other0.222
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg20.408
r_scangle_it4.759
r_scbond_it2.805
r_dihedral_angle_1_deg2.791
r_angle_refined_deg1.698
r_mcangle_it1.686
r_angle_other_deg0.989
r_mcbond_it0.867
r_xyhbond_nbd_refined0.495
r_xyhbond_nbd_other0.222
r_nbd_other0.214
r_nbd_refined0.21
r_symmetry_vdw_other0.137
r_symmetry_vdw_refined0.096
r_chiral_restr0.094
r_symmetry_hbond_refined0.082
r_bond_refined_d0.019
r_gen_planes_refined0.008
r_gen_planes_other0.004
r_bond_other_d0.001
r_nbtor_other
r_symmetry_hbond_other
r_rigid_bond_restr
r_sphericity_free
r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms527
Nucleic Acid Atoms
Solvent Atoms28
Heterogen Atoms

Software

Software
Software NamePurpose
REFMACrefinement
SCALEPACKdata scaling
CNSrefinement
DENZOdata reduction
CNSphasing