1LO1

ESTROGEN RELATED RECEPTOR 2 DNA BINDING DOMAIN IN COMPLEX WITH DNA


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
13D_13C-separated_NOESY0.5 mM hERR2 U-15N 13C, 0.5 mM DNA Strand 1, 0.5 mM DNA Strand 2, 20 mM K2SO4, 50 M ZnSO4, 2 mM dithiothreitol (DTT), 0.001% NaN3 pH 6.8100% D2020 mM K2SO46.8ambient310
23D_15N-separated_NOESY0.5 mM hERR2 U-15N, 0.5 mM DNA Strand 1, 0.5 mM DNA Strand 2, 20 mM K2SO4, 50 M ZnSO4, 2 mM dithiothreitol (DTT), 0.001% NaN3 pH 6.85% D2O, 95% H2020 mM K2SO46.8ambient310
32D Filter Edit Noesy0.5 mM hERR2 U-15N 13C, 0.5 mM DNA Strand 1, 0.5 mM DNA Strand 2, 20 mM K2SO4, 50 M ZnSO4, 2 mM dithiothreitol (DTT), 0.001% NaN3 pH 6.8100% D2020 mM K2SO46.8ambient310
42D Filter Filter Noesy0.5 mM hERR2 U-15N, 0.5 mM DNA Strand 1, 0.5 mM DNA Strand 2, 20 mM K2SO4, 50 M ZnSO4, 2 mM dithiothreitol (DTT), 0.001% NaN3 pH 6.85% D2O, 95% H2020 mM K2SO46.8ambient310
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerDRX600
2BrukerDRX800
3BrukerDMX750
NMR Refinement
MethodDetailsSoftware
distance geometry simulated annealingNMRPipe
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number32
Conformers Submitted Total Number20
Representative Model1 (lowest energy)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1processingNMRPipe2.1F.Delaglio, S.Grzesiek, G.W.Vuister, Z.Guang, J.Pfeifer, A.Bax
2data analysisNMRView4.1.3B.A.Johnson, R.A.Blevins
3refinementAmber6.0D.A.Case, D.A.Pearlman, et.al.
4refinementDYANA1.5P.Gntert, C.Mumenthaler, K.Wthrich
5structure solutionAmber6.0D.A.Case, D.A.Pearlman, J.W.Caldwell, T.E.Cheatham III, W.S.Ross, C.L.Simmerling, T.A.Darden, K.M.Merz, R.V.Stanton, A.L.Cheng, J.J.Vincent, M.Crowley, V.Tsui, R.J.Radmer, Y.Duan, J.Pitera, I.Massova, G.L.Seibel, U.C.Singh, P.K.Weiner, and P.A.Kollman