1LIL

BENCE JONES PROTEIN CLE, A LAMBDA III IMMUNOGLOBULIN LIGHT-CHAIN DIMER


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
171.8 M AMMONIUM SULFATE PH 7.0
Crystal Properties
Matthews coefficientSolvent content
2.1643

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 113.17α = 90
b = 72.54β = 90
c = 49.25γ = 90
Symmetry
Space GroupP 21 21 21

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray293AREA DETECTORXUONG-HAMLIN MULTIWIRE1989-04-19M
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
12.65920.047113732

Refinement

Statistics
Diffraction IDStructure Solution MethodStarting modelResolution (High)Resolution (Low)Cut-off Sigma (F)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTMCG(AS)2.651028684710.20.190.34RANDOM15.5
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
RMS Deviations
KeyRefinement Restraint Deviation
p_transverse_tor29.7
p_staggered_tor24.6
p_planar_tor2.3
p_multtor_nbd0.31
p_xyhbond_nbd0.28
p_singtor_nbd0.21
p_chiral_restr0.169
p_planar_d0.047
p_angle_d0.039
p_bond_d0.014
RMS Deviations
KeyRefinement Restraint Deviation
p_transverse_tor29.7
p_staggered_tor24.6
p_planar_tor2.3
p_multtor_nbd0.31
p_xyhbond_nbd0.28
p_singtor_nbd0.21
p_chiral_restr0.169
p_planar_d0.047
p_angle_d0.039
p_bond_d0.014
p_plane_restr0.013
p_angle_deg
p_hb_or_metal_coord
p_mcbond_it
p_mcangle_it
p_scbond_it
p_scangle_it
p_xhyhbond_nbd
p_orthonormal_tor
p_special_tor
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms3190
Nucleic Acid Atoms
Solvent Atoms123
Heterogen Atoms

Software

Software
Software NamePurpose
LARRYdata collection
SCALINGdata reduction
X-PLORmodel building
PROLSQrefinement
X-PLORrefinement
LARRYdata reduction
SCALINGdata scaling
X-PLORphasing