1L3G

NMR Structure of the DNA-binding Domain of Cell Cycle Protein, Mbp1(2-124) from Saccharomyces cerevisiae


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
13D_15N-separated_NOESYMbp1 U-15N,13C 40mM Na-Phosphate, 100mM NaCl90% H2O/10% D2O7.6288
23D_13C-separated_NOESYMbp1 U-15N, 40mM Na-Phosphate, 100mM NaCl90% H2O/10% D2O
3HNHA
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1VarianINOVA600
2VarianUNITY600
3VarianUNITYPLUS500
NMR Refinement
MethodDetailsSoftware
simulated annealing, energy minimization13 C-terminal tag residues (KLAAALEHHHHHH) were excluded from structure calculations.DYANA
NMR Ensemble Information
Conformer Selection CriteriaA total of 1000 conformers calculated. 100 conformers with low target function selected for refinement. Final set comprises 19 conformers with least restraint violation.
Conformers Calculated Total Number1000
Conformers Submitted Total Number19
Representative Model9 (closest to the average)
Additional NMR Experimental Information
Details2D J-modulated HSQC experiments were recorded on partially aligned U15N labelled sample to measure residual dipolar couplings
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1structure solutionDYANA1.5Guntert
2processingNMRPipe1.8Delaglio
3collectionVNMR6.1BVarian
4refinementX-PLOR3.8Brunger
5structure solutionTALOS98.040.21.02Cornilescu