1KKD

Solution structure of the calmodulin binding domain (CaMBD) of small conductance Ca2+-activated potassium channels (SK2)


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
13D_15N-separated_NOESY1.2 mM U-15N CaMBD (residues 396-487 of rat SK2); 250 mM NaCl, 0.05 % Na-azide90% H2O/10% D2O250 mM3.5ambient298
2HNHA1.2 mM U-15N CaMBD (residues 396-487 of rat SK2); 250 mM NaCl, 0.05 % Na-azide90% H2O/10% D2O250 mM3.5ambient298
32D NOESY1 mM CaMBD (residues 396-487 of rat SK2); 250 mM NaCl, 0.05 % Na-azide90% H2O/10% D2O250 mM3.5ambient298
42D NOESY1 mM CaMBD (residues 396-487 of rat SK2); 250 mM NaCl, 0.05 % Na-azide100% D2O250 mM3.5ambient298
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAVANCE600
2BrukerAVANCE800
NMR Refinement
MethodDetailsSoftware
SIMULATED ANNEALING, TORSION ANGLE DYNAMICSsee Table 1 in the primary citation for structural statisticsXwinNMR
NMR Ensemble Information
Conformer Selection Criteriastructures with the least restraint violations,target function
Conformers Calculated Total Number300
Conformers Submitted Total Number23
Representative Model22 (closest to the average)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1collectionXwinNMR2.6Bruker
2data analysisAURELIA2.7.5Neidig
3data analysisXEASY1.3.13ETH Zuerich
4structure solutionDYANA1.5MUMENTHALER, GUENTERT
5refinementDYANA1.5MUMENTHALER, GUENTERT