1JBJ

CD3 Epsilon and gamma Ectodomain Fragment Complex in Single-Chain Construct


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
1HNCA,HN(CO)CA,HN(CA)CB,HN(COCA)CB,HNCO,HN(CA)COU-15N,13C,2D; 5 mM sodium acetate, pH 4.590% H2O/10% D2O5 mM sodium acetate4.5ambient298
22D-NOESY,2D-TOCSYunlabeled; 5 mM sodium acetate, pH 4.5100% D2O5 mM sodium acetate4.5ambient298
3H(CCO)NHU-15N,13C, U-70% 2D; 5 mM sodium acetate, pH 4.590% H2O/10% D2O5 mM sodium acetate4.5ambient298
415N-NOESYHSQC,TOCSYU-15N; 5 mM sodium acetate, pH 4.590% H2O/10% D2O5 mM sodium acetate4.5ambient298
513C-NOESYHSQC,TOCSYU-13C; 5 mM sodium acetate, pH 4.5100% D2O5 mM sodium acetate4.5ambient298
613C-HSQCU-10% 13C; 5 mM sodium acetate, pH 4.5100% D2O5 mM sodium acetate4.5ambient298
715N-HSQC,HNHA,HNHBU-15N; 5 mM sodium acetate, pH 4.590% H2O/10% D2O5 mM sodium acetate4.5ambient298
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAVANCE500
2VarianINOVA750
3VarianINOVA500
NMR Refinement
MethodDetailsSoftware
simulated annealingcalculated using 1623 NOE restraints, 105 H-bond restraints, and 194 dihedral angle restrintsPROSA
NMR Ensemble Information
Conformer Selection Criteriastructures with the least restraint violations
Conformers Calculated Total Number20
Conformers Submitted Total Number18
Representative Model12 (lowest energy)
Additional NMR Experimental Information
DetailsThe structure was determined using triple-resonance NMR spectroscopy. Structures are superimposed based on backbone atoms from residues 7 to 79 and 113 to 184.
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1processingPROSA3.7Guntert
2data analysisXEASY1.3.13Bartels
3structure solutionDYANA1.4Guntert
4structure solutionX-PLOR3.1Brunger
5refinementX-PLOR3.1Brunger