1I7V

THE SOLUTION STRUCTURE OF A BAY REGION 1R-BENZ[A]ANTHRACENE OXIDE ADDUCT AT THE N6 POSITION OF ADENINE OF AN OLIGODEOXYNUCLEOTIDE CONTAINING THE HUMAN N-RAS CODON 61 SEQUENCE


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D NOESY1.8 mM oligodeoxynucleotide, 10 mM phosphate buffer, 0.05 mM EDTA, 0.1 M NaCl90% H2O/10% D2O0.1 M NaCl7.01 atm278
22D NOESY1.8 mM oligodeoxynucleotide, 10 mM phosphate buffer, 0.05 mM EDTA, 0.1 M NaCl100% D2O0.1 M NaCl7.01 atm288
3DQF-COSY1.8 mM oligodeoxynucleotide, 10 mM phosphate buffer, 0.05 mM EDTA, 0.1 M NaCl100% D2O0.1 M NaCl7.01 atm288
4TOCSY1.8 mM oligodeoxynucleotide, 10 mM phosphate buffer, 0.05 mM EDTA, 0.1 M NaCl100% D2O0.1 M NaCl7.01 atm288
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerDMX500
2BrukerDMX750
NMR Refinement
MethodDetailsSoftware
NOE-restrained molecular dynamics/simulated annealingThe structure was based on a total of 485 NOE derived distance constraints.XwinNMR
NMR Ensemble Information
Conformer Selection Criteriaback calculated data agree with experimental NOESY spectrum
Conformers Calculated Total Number1
Conformers Submitted Total Number1
Additional NMR Experimental Information
DetailsThis structure was determined using 2D homonuclear techniques
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1collectionXwinNMR2.0Bruker
2structure solutionX-PLOR3.851A. Brunger
3processingFelix97.0Biosym Technologies
4refinementCORMA5.2Borgias, B.A., Thomas, P.D., Li, H., Kumar, A., and Tonelli, M.
5iterative matrix relaxationMARDIGRAS3.0Borgias, B.A., Thomas, P.D., Li, H., Kumar, A., and Tonelli, M.