1I5V

SOLUTION STRUCTURE OF 2-(PYRIDO[1,2-E]PURIN-4-YL)AMINO-ETHANOL INTERCALATED IN THE DNA DUPLEX D(CGATCG)2


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D NOESY2 mM 2-(pyrido[1,2-e]purin-4-yl)amino-ethanol, 2mM d(CGATCG)2 160 mM KCl, 0.15 mM EDTA, 20 mM sodium phosphate90% H2O/10% D2O7ambient7
22D NOESY2 mM 2-(pyrido[1,2-e]purin-4-yl)amino-ethanol, 2mM d(CGATCG)2 160 mM KCl, 0.15 mM EDTA, 20 mM sodium phosphate100% D2O7ambient7
3DQF-COSY2 mM 2-(pyrido[1,2-e]purin-4-yl)amino-ethanol, 2mM d(CGATCG)2 160 mM KCl, 0.15 mM EDTA, 20 mM sodium phosphate90% H2O/10% D2O
4TOCSY2 mM 2-(pyrido[1,2-e]purin-4-yl)amino-ethanol, 2mM d(CGATCG)2 160 mM KCl, 0.15 mM EDTA, 20 mM sodium phosphate90% H2O/10% D2O
51H-1H CT COSY2 mM 2-(pyrido[1,2-e]purin-4-yl)amino-ethanol, 2mM d(CGATCG)2 160 mM KCl, 0.15 mM EDTA, 20 mM sodium phosphate90% H2O/10% D2O
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1VarianINOVA800
2BrukerAMX600
3BrukerAMX400
NMR Refinement
MethodDetailsSoftware
simulated annealingcalculation from randomized cartesian coordinatesVNMR
NMR Ensemble Information
Conformer Selection CriteriaThe submitted conformer models are the 22 structures with the lowest experimental energy
Conformers Calculated Total Number100
Conformers Submitted Total Number22
Representative Model12 (closest to the average)
Additional NMR Experimental Information
DetailsThis structure was determined using standard 2D homonuclear techniques.
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1collectionVNMR6.A
2processingFelix
3data analysisInsight97
4structure solutionDiscover
5refinementDiscover