1HTX

SOLUTION STRUCTURE OF THE MAIN ALPHA-AMYLASE INHIBITOR FROM AMARANTH SEEDS


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
1DQF-COSY1.8 mM AAI, 0.05 mM NaN390% H2O/10% D2O2.95ambient277
2DQF-COSY1.8 mM AAI, 0.05 mM NaN3100% D2O2.95ambient277
3TOCSY1.8 mM AAI, 0.05 mM NaN390% H2O/10% D2O2.95ambient277
4TOCSY1.8 mM AAI, 0.05 mM NaN390% H2O/10% D2O2.95ambient277
52D NOESY1.8 mM AAI, 0.05 mM NaN390% H2O/10% D2O2.95ambient277
62D NOESY1.8 mM AAI, 0.05 mM NaN3100% D2O2.95ambient277
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAVANCE600
2BrukerAMX500
3VarianUNITY600
NMR Refinement
MethodDetailsSoftware
simulated annealingrestrained MD at 1000K follwed by stepwise cooling to 300K and final restrained energy optimisationXwinNMR
NMR Ensemble Information
Conformer Selection Criteriastructures with favorable non-bond energy,structures with the least restraint violations
Conformers Calculated Total Number100
Conformers Submitted Total Number20
Representative Model1 (n/a)
Additional NMR Experimental Information
DetailsThis structure was determined from 2D 1H NMR techniques only using the sequence specific resonance assignment procedure, followed by NOE and J data collection, calculation bij X-plor and refinement with MSI's CVFF forcefield
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1collectionXwinNMR2.5Bruker
2collectionVNMRVarian
3structure solutionX-PLOR3.1Nilges, M.
4refinementNMR_Refine98.0MSI