1HQB

TERTIARY STRUCTURE OF APO-D-ALANYL CARRIER PROTEIN


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
13D_15N-SEPARATED_NOESY1.2 MM [U-15N]APO-DCP, 50 MM PHOSPHATE BUFFER90% H2O/10% D2O50 mM PHOSPHATE5.80AMBIENT298.00
23D_13C-SEPARATED_NOESY1.2 MM [U-15N]APO-DCP, 50 MM PHOSPHATE BUFFER90% H2O/10% D2O50 mM PHOSPHATE5.80AMBIENT298.00
32D 15N-FILTERED NOESY1.2 MM [U-15N]APO-DCP, 50 MM PHOSPHATE BUFFER90% H2O/10% D2O50 mM PHOSPHATE5.80AMBIENT298.00
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerDMX600
NMR Refinement
MethodDetailsSoftware
torsion angle dynamicsTHE STRUCTURES ARE BASED ON A TOTAL OF 1582 NON-TRIVIAL UPPER-LIMIT DISTANCE CONSTRAINTS (332 LONG-RANGE, 560 MEDIUM-RANGE, 372 SEQUENTIAL AND 318 INTRARESIDUE), DERIVED FROM 3288 ASSIGNED NOES FROM 4 2D AND 3D SPECTRA. THIS CORRESPONDS TO AN AVERAGE OF 19.8 CONSTRAINTS/RESIDUE. NO ADDITIONAL CONSTRAINTS WERE INCLUDED. STRUCTURES WERE GENERATED USING THE ANNEAL FUNCTION OF THE PROGRAM DYANA 1.5, WITH 8000 TORSION ANGLE DYNAMICS STEPS FOR EACH STRUCTURE. THE AVERAGE DYANA TARGET FUNCTION FOR THE 30 CONFORMERS WAS 0.68 +/- 0.11. THE AVERAGE BACKBONE ATOMIC RMSD TO THE MEAN STRUCTURE FOR RESIDUES 4-81 IS 0.43 +/- 0.08 ANGSTROMS, AND 0.86 +/- 0.09 FOR ALL NON-HYDROGEN ATOMS (RESIDUES 4-81).DYANA
NMR Ensemble Information
Conformer Selection Criteria
Conformers Calculated Total Number1
Conformers Submitted Total Number1
Representative Model1 (minimized average structure)
Additional NMR Experimental Information
DetailsCOMPLETE RESONANCE ASSIGNMENTS OBTAINED WITH TRIPLE-RESONANCE NMR DATA AS DESCRIBED IN THE PRIMARY CITATION.
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1refinementDYANA1.5PETER GUNTERT
2processingFelix95MSI
3processingNMRPipeFrank Delaglio, NIH
4collectionXwinNMR2.3Bruker
5data analysisXEASY1.3Guntert