1HLQ

CRYSTAL STRUCTURE OF RHODOFERAX FERMENTANS HIGH POTENTIAL IRON-SULFUR PROTEIN REFINED TO 1.45 A


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, HANGING DROP8290HiPIP (20mg/ml, 20mM Tris pH 8, 2mM Beta-mercaptoethanol, 3.2M (NH4)2SO4 in 100mM Tris buffer, VAPOR DIFFUSION, HANGING DROP, temperature 290K
Crystal Properties
Matthews coefficientSolvent content
2.1141

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 88.312α = 90
b = 88.312β = 90
c = 61.34γ = 90
Symmetry
Space GroupP 43 21 2

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100IMAGE PLATEMARRESEARCHmirrors1997-04-23MSINGLE WAVELENGTH
21x-ray100IMAGE PLATEMARRESEARCHmirrors1997-06-09MMAD
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONEMBL/DESY, HAMBURG BEAMLINE BW7B1.105EMBL/DESY, HAMBURGBW7B
2SYNCHROTRONEMBL/DESY, HAMBURG BEAMLINE BW7A1.738, 1.742, 0.995EMBL/DESY, HAMBURGBW7A

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
1,21.4522.09990.0476.95.6429754297517.254
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
1.451.5395.40.4120.63.85912

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (All)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (All)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMADFREE R-VALUE1.45224273342733215199.60.1860.1860.1870.218random
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
RMS Deviations
KeyRefinement Restraint Deviation
p_transverse_tor15.8
p_staggered_tor13.9
p_plane_restr8.4
p_planar_tor8.4
p_scangle_it2.079
p_mcangle_it1.908
p_scbond_it1.508
p_mcbond_it1.311
p_multtor_nbd0.259
p_singtor_nbd0.157
RMS Deviations
KeyRefinement Restraint Deviation
p_transverse_tor15.8
p_staggered_tor13.9
p_plane_restr8.4
p_planar_tor8.4
p_scangle_it2.079
p_mcangle_it1.908
p_scbond_it1.508
p_mcbond_it1.311
p_multtor_nbd0.259
p_singtor_nbd0.157
p_xyhbond_nbd0.124
p_chiral_restr0.098
p_planar_d0.068
p_angle_d0.026
p_bond_d0.008
p_xhyhbond_nbd
p_hb_or_metal_coord
p_orthonormal_tor
p_special_tor
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms1688
Nucleic Acid Atoms
Solvent Atoms281
Heterogen Atoms54

Software

Software
Software NamePurpose
MOSFLMdata reduction
SCALAdata scaling
SHARPphasing
REFMACrefinement
CCP4data scaling