1HDB

ANALYSIS OF THE CRYSTAL STRUCTURE, MOLECULAR MODELING AND INFRARED SPECTROSCOPY OF THE DISTAL BETA-HEME POCKET VALINE67(E11)-THREONINE MUTATION OF HEMOGLOBIN


X-RAY DIFFRACTION

Crystallization

Crystal Properties
Matthews coefficientSolvent content
2.2745.8

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 63.54α = 90
b = 83.19β = 99.15
c = 54.02γ = 90
Symmetry
Space GroupP 1 21 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray1994-07-04

Data Collection

Refinement

Statistics
Diffraction IDStructure Solution MethodResolution (High)Resolution (Low)Cut-off Sigma (F)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeMean Isotropic B
X-RAY DIFFRACTION2.262216690.14921.43
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
RMS Deviations
KeyRefinement Restraint Deviation
p_orthonormal_tor31.7
p_staggered_tor17.4
p_planar_tor3.5
p_scangle_it2.031
p_scbond_it1.279
p_mcangle_it1.14
p_mcbond_it0.676
p_multtor_nbd0.187
p_singtor_nbd0.186
p_chiral_restr0.181
RMS Deviations
KeyRefinement Restraint Deviation
p_orthonormal_tor31.7
p_staggered_tor17.4
p_planar_tor3.5
p_scangle_it2.031
p_scbond_it1.279
p_mcangle_it1.14
p_mcbond_it0.676
p_multtor_nbd0.187
p_singtor_nbd0.186
p_chiral_restr0.181
p_xhyhbond_nbd0.174
p_planar_d0.039
p_angle_d0.038
p_plane_restr0.023
p_bond_d0.017
p_angle_deg
p_hb_or_metal_coord
p_xyhbond_nbd
p_transverse_tor
p_special_tor
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms4384
Nucleic Acid Atoms
Solvent Atoms434
Heterogen Atoms182

Software

Software
Software NamePurpose
GPRLSArefinement
XENGENdata reduction