1H9S

Molybdate bound complex of Dimop domain of ModE from E.coli


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
17.6pH 7.60
Crystal Properties
Matthews coefficientSolvent content
2.1843.68

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 72.34α = 90
b = 73.34β = 90
c = 49.56γ = 90
Symmetry
Space GroupP 41

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100IMAGE PLATERIGAKU RAXIS IVMIRRORSMSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1ROTATING ANODERIGAKU RU200

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Sym I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.93097.90.4927.892041027

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodStarting modelResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUTPDB ENTRY 1B9N1.822022803118298.10.1880.234RANDOM34.2
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
RMS Deviations
KeyRefinement Restraint Deviation
p_transverse_tor29.09
p_staggered_tor14.021
p_planar_tor3.109
p_scangle_it2.825
p_mcangle_it2.266
p_scbond_it1.777
p_mcbond_it1.72
p_xhyhbond_nbd0.255
p_multtor_nbd0.219
p_singtor_nbd0.182
RMS Deviations
KeyRefinement Restraint Deviation
p_transverse_tor29.09
p_staggered_tor14.021
p_planar_tor3.109
p_scangle_it2.825
p_mcangle_it2.266
p_scbond_it1.777
p_mcbond_it1.72
p_xhyhbond_nbd0.255
p_multtor_nbd0.219
p_singtor_nbd0.182
p_xyhbond_nbd0.133
p_chiral_restr0.126
p_planar_d0.03
p_angle_d0.029
p_plane_restr0.029
p_bond_d0.01
p_angle_deg
p_hb_or_metal_coord
p_orthonormal_tor
p_special_tor
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms2063
Nucleic Acid Atoms
Solvent Atoms227
Heterogen Atoms10

Software

Software
Software NamePurpose
REFMACrefinement
DENZOdata reduction
SCALEPACKdata scaling
AMoREphasing