X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
17.5100MM NA HEPES, 150MM KSCN 20% ETHYLENE GLYCOL, 20% PEG3350, pH 7.50
Crystal Properties
Matthews coefficientSolvent content
358.8

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 93.27α = 90
b = 93.27β = 90
c = 83.055γ = 90
Symmetry
Space GroupP 43 21 2

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray110 MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONESRF BEAMLINE ID14-4ESRFID14-4

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
12.342099.80.08618.455.929468
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
12.342.381000.2676.755

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMADTHROUGHOUT2.3420151587981000.1960.1930.243RANDOM28.78
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-2.49-2.494.98
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg35.524
r_dihedral_angle_4_deg21.397
r_dihedral_angle_3_deg16.098
r_dihedral_angle_1_deg7.578
r_scangle_it4.205
r_scbond_it2.835
r_angle_refined_deg1.677
r_mcangle_it1.417
r_mcbond_it0.756
r_symmetry_vdw_refined0.223
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg35.524
r_dihedral_angle_4_deg21.397
r_dihedral_angle_3_deg16.098
r_dihedral_angle_1_deg7.578
r_scangle_it4.205
r_scbond_it2.835
r_angle_refined_deg1.677
r_mcangle_it1.417
r_mcbond_it0.756
r_symmetry_vdw_refined0.223
r_nbd_refined0.205
r_xyhbond_nbd_refined0.128
r_chiral_restr0.12
r_symmetry_hbond_refined0.12
r_bond_refined_d0.018
r_gen_planes_refined0.007
r_bond_other_d
r_angle_other_deg
r_gen_planes_other
r_nbd_other
r_nbtor_refined
r_nbtor_other
r_xyhbond_nbd_other
r_metal_ion_refined
r_metal_ion_other
r_symmetry_vdw_other
r_symmetry_hbond_other
r_symmetry_metal_ion_refined
r_symmetry_metal_ion_other
r_mcbond_other
r_mcangle_other
r_scbond_other
r_scangle_other
r_long_range_B_refined
r_long_range_B_other
r_rigid_bond_restr
r_sphericity_free
r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms2260
Nucleic Acid Atoms
Solvent Atoms92
Heterogen Atoms

Software

Software
Software NamePurpose
REFMACrefinement
DENZOdata reduction
SCALEPACKdata scaling
SOLVEphasing