1FV7
A TWO B-Z JUNCTION CONTAINING DNA RESOLVES INTO AN ALL RIGHT HANDED DOUBLE HELIX
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 2D NOESY | 2 mM DNA; 0.1 M phosphate Buffer | 0.1 | 7 | 293 | |||
2 | P-COSY | 2 mM DNA; 0.1 M phosphate Buffer | 0.1 | 7 | 293 | |||
3 | TOCSY | 2 mM DNA; 0.1 M phosphate Buffer | 0.1 | 7 | 293 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | AMX | 500 |
NMR Refinement | ||
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Method | Details | Software |
simulated annealing, torsion angle dynamics | the structures are based on a total of 504 restraints, 390 are NOE-derived distance constraints, 104 dihedral angle restraints,36 distance restraints from hydrogen bonds. | Felix |
NMR Ensemble Information | |
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Conformer Selection Criteria | lower energy structures, restraints violations, and the average structure |
Conformers Calculated Total Number | 50 |
Conformers Submitted Total Number | 11 |
Representative Model | 10 (n/a) |
Additional NMR Experimental Information | |
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Details | This structure was determined using standard 2D homonuclear techniques |
Computation: NMR Software | ||||
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# | Classification | Version | Software Name | Author |
1 | data analysis | Felix | MSI | |
2 | refinement | CNS | BRUNGER et al., 1998 |