1F6H

COMBINED RIETVELD AND STEREOCHEMICAL RESTRAINT REFINEMENT OF A PROTEIN


POWDER DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1grinding6.37300saturated ammonium sulphate, sodium dihydrogen phosphate, dipotassium phosphate, powder slurry in 1.5mm capillary, 4mm long, pH 6.37, grinding, temperature 300K
Crystal Properties
Matthews coefficientSolvent content
1.935.15

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 64.4113α = 90
b = 30.1946β = 105.834
c = 34.9476γ = 90
Symmetry
Space GroupP 1 21 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11300SCINTILLATOR2MM X 8MM BEAM ANALYZER : GE(111)1998-03-20MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONNSLS BEAMLINE X3B1NSLSX3B1

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
13.3147.06100120882088

Refinement

Statistics
Diffraction IDStructure Solution MethodResolution (High)Resolution (Low)Number Reflections (All)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (All)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTION3.3147.06208820881000.0350.035R-factor on F**2 extracted from powder data during Rietveld refinement
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
RMS Deviations
KeyRefinement Restraint Deviation
o-torsion_deg4.33
o_angle_deg1.63
o-torsion_pseudopotentials1.41
o-Hbond (A)0.199
o-chiral volume A**30.153
o-antibump (A)0.049
o_bond_d0.023
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms1217
Nucleic Acid Atoms
Solvent Atoms
Heterogen Atoms44

Software

Software
Software NamePurpose
GSASrefinement
PROCESSdata scaling