1F4S

STRUCTURE OF TRANSCRIPTIONAL FACTOR ALCR IN COMPLEX WITH A TARGET DNA


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D NOESY1 mM AlcR U-15N, 1.1 mM double stranded DNA20 mM phosphate buffer; 90%H2O, 10%D2O; pH 5.95.91 atm293
23D_15N-separated_NOESY1 mM AlcR U-15N, 1.1 mM double stranded DNA20 mM phosphate buffer; 90%H2O, 10%D2O; pH 5.95.91 atm293
3HNHA1 mM AlcR U-15N, 1.1 mM double stranded DNA20 mM phosphate buffer; 90%H2O, 10%D2O; pH 5.95.91 atm293
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerDRX800
2BrukerDMX600
NMR Refinement
MethodDetailsSoftware
distance geometry, simulated annealing1142 noe-derived constraints, 76 h-bond constraints, 33 phi angle restraints, 118 loose angle restraints on the DNA backboneXwinNMR
NMR Ensemble Information
Conformer Selection CriteriaThe submitted conformer models are the 10 structures with the lowest energy.
Conformers Calculated Total Number20
Conformers Submitted Total Number10
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1processingXwinNMR2.1
2processingGifa4Delsuc, M.A.
3structure solutionDIANAGntert
4refinementX-PLOR3.1Brunger