1DQS

CRYSTAL STRUCTURE OF DEHYDROQUINATE SYNTHASE (DHQS) COMPLEXED WITH CARBAPHOSPHONATE, NAD+ AND ZN2+


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
16.8pH 6.8
Crystal Properties
Matthews coefficientSolvent content
1.932

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 67.677α = 90
b = 80.81β = 90
c = 143.513γ = 90
Symmetry
Space GroupP 21 21 21

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100IMAGE PLATEMARRESEARCH1996-02-19MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONSRS BEAMLINE PX7.2SRSPX7.2

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.72591.20.06815.13.779632-319.22
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
1.71.7684.80.3413.3

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONSIRASTHROUGHOUT1.82564534338591.20.17350.224RANDOM20.58
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
RMS Deviations
KeyRefinement Restraint Deviation
p_transverse_tor24.7
p_staggered_tor15.2
p_planar_tor4
p_scangle_it2.28
p_mcangle_it1.763
p_scbond_it1.617
p_mcbond_it1.301
p_multtor_nbd0.18
p_singtor_nbd0.175
p_chiral_restr0.119
RMS Deviations
KeyRefinement Restraint Deviation
p_transverse_tor24.7
p_staggered_tor15.2
p_planar_tor4
p_scangle_it2.28
p_mcangle_it1.763
p_scbond_it1.617
p_mcbond_it1.301
p_multtor_nbd0.18
p_singtor_nbd0.175
p_chiral_restr0.119
p_planar_d0.032
p_angle_d0.029
p_bond_d0.012
p_angle_deg
p_hb_or_metal_coord
p_plane_restr
p_xhyhbond_nbd
p_xyhbond_nbd
p_orthonormal_tor
p_special_tor
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms5696
Nucleic Acid Atoms
Solvent Atoms718
Heterogen Atoms125

Software

Software
Software NamePurpose
HASSPmodel building
MLPHAREphasing
DMMultimodel building
ENVATmodel building
REFMACrefinement
DENZOdata reduction
SCALEPACKdata scaling
HASSPphasing
DMMultiphasing
ENVATphasing