1DI7

1.60 ANGSTROM CRYSTAL STRUCTURE OF THE MOLYBDENUM COFACTOR BIOSYNTHESIS PROTEIN MOGA FROM ESCHERICHIA COLI


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION92952.3 - 2.4 M AMMONIUM SULFATE, 0.1 M BICINE pH 9.0, VAPOR DIFFUSION, temperature 295K
Crystal Properties
Matthews coefficientSolvent content
1.934

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 65.5α = 90
b = 65.5β = 90
c = 64.347γ = 120
Symmetry
Space GroupP 63

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray95IMAGE PLATEMARRESEARCH1998-10-08MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONNSLS BEAMLINE X26CNSLSX26C

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.65091.50.052184.4831861848015
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
11.61.6697.70.2892.7

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (All)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (All)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMIRTHROUGHOUT1.620174781747897091.50.2060.2060.2050.226RANDOM18.7
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
RMS Deviations
KeyRefinement Restraint Deviation
p_transverse_tor21.7
p_staggered_tor14.6
p_scangle_it4.627
p_planar_tor3.8
p_mcangle_it3.433
p_scbond_it3.197
p_mcbond_it2.582
p_multtor_nbd0.257
p_singtor_nbd0.189
p_xyhbond_nbd0.153
RMS Deviations
KeyRefinement Restraint Deviation
p_transverse_tor21.7
p_staggered_tor14.6
p_scangle_it4.627
p_planar_tor3.8
p_mcangle_it3.433
p_scbond_it3.197
p_mcbond_it2.582
p_multtor_nbd0.257
p_singtor_nbd0.189
p_xyhbond_nbd0.153
p_chiral_restr0.12
p_planar_d0.037
p_angle_d0.03
p_plane_restr0.021
p_bond_d0.012
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms1375
Nucleic Acid Atoms
Solvent Atoms160
Heterogen Atoms15

Software

Software
Software NamePurpose
SHARPphasing
REFMACrefinement
X-PLORrefinement
DENZOdata reduction
SCALEPACKdata scaling