1D6G

MOLECULAR COMPLEX OF CHOLECYSTOKININ-8 AND N-TERMINUS OF THE CHOLECYSTOKININ A RECEPTOR BY NMR SPECTROSCOPY


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D NOESY1.6mM CCK-A_R(1-47), 171 mM DPC-d3890% H2O/10% D2O6.5ambient285
22D NOESY1.5mM CCK-8, 137mM DPC-d3890% H2O/10% D2O6.5ambient298
32D NOESY1.6mM CCK-A-R(1-47) + 3mM CCK-8, 171 mM DPC-d38100% D2O or 90% H2O, 10% D2O6.5ambient308
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1VarianUNITY500
2BrukerAVANCE DRX600
3VarianUNITY750
NMR Refinement
MethodDetailsSoftware
distance geometry, simulated annealing, molecular dynamicsThe structures of CCK-A-R(1-47) and CCK-8 were calculated separately. The complex was calculated using intra- and intermolecular NOEs using simulated annealing and molecular dynamics calculations. The calculations utilized explicit solvent, as a decane/water simulation cell.GROMACS
NMR Ensemble Information
Conformer Selection Criteria
Conformers Calculated Total Number90
Conformers Submitted Total Number1
Representative Model (lowest energy)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1refinementGROMACS1.6van der Spoel, D.; van Buuren, A.R.; Apol, E.; Meulenhoff, P.J.; Tielman, D.P.; Sijbers, A.L.T.M.; van Drunen, R.; Berendsen, H.J.C.
2structure solutionDistance Geometryhome writtenMierke, D.F.