1BYP

E43K,D44K DOUBLE MUTANT PLASTOCYANIN FROM SILENE


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
172.8M AMMONIUM SULFATE, 100MM POTASSIUM PHOSPHATE, pH 7.0
Crystal Properties
Matthews coefficientSolvent content
2.5452

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 55.9α = 90
b = 55.9β = 90
c = 68.2γ = 90
Symmetry
Space GroupP 43 21 2

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray300IMAGE PLATERIGAKU1995-01-15MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1ROTATING ANODERIGAKU RU300

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.753093.60.0564.910737

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodStarting modelResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUTPDB ENTRY 1PCY1.752010731515930.180.1880.199RANDOM
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
RMS Deviations
KeyRefinement Restraint Deviation
p_staggered_tor21.3
p_planar_tor6.5
p_scangle_it6.195
p_scbond_it4.389
p_mcangle_it3.337
p_mcbond_it2.52
p_chiral_restr0.234
p_planar_d0.038
p_angle_d0.022
p_bond_d0.007
RMS Deviations
KeyRefinement Restraint Deviation
p_staggered_tor21.3
p_planar_tor6.5
p_scangle_it6.195
p_scbond_it4.389
p_mcangle_it3.337
p_mcbond_it2.52
p_chiral_restr0.234
p_planar_d0.038
p_angle_d0.022
p_bond_d0.007
p_angle_deg
p_hb_or_metal_coord
p_plane_restr
p_singtor_nbd
p_multtor_nbd
p_xhyhbond_nbd
p_xyhbond_nbd
p_orthonormal_tor
p_transverse_tor
p_special_tor
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms732
Nucleic Acid Atoms
Solvent Atoms73
Heterogen Atoms1

Software

Software
Software NamePurpose
AMoREphasing
REFMACrefinement