1BXA

AMICYANIN REDUCED, PH 4.4, 1.3 ANGSTROMS


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
14.38pH 4.38
Crystal Properties
Matthews coefficientSolvent content
1.9632

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 28.96α = 90
b = 56.91β = 96.81
c = 27.61γ = 90
Symmetry
Space GroupP 1 21 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray273AREA DETECTORXUONG-HAMLIN MULTIWIREMSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1ROTATING ANODERIGAKU RU200

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.319.8950.041184.92106211.4
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
1.31.45840.09844.4

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodStarting modelResolution (High)Resolution (Low)Cut-off Sigma (F)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONOTHERTHROUGHOUT1AAC1.36220292201993.60.1690.1690.195RANDOM13.2
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
RMS Deviations
KeyRefinement Restraint Deviation
x_dihedral_angle_d27.5
x_scangle_it3.02
x_scbond_it1.84
x_improper_angle_d1.55
x_mcangle_it1.49
x_angle_deg1
x_mcbond_it0.91
x_bond_d0.008
x_bond_d_na
x_bond_d_prot
RMS Deviations
KeyRefinement Restraint Deviation
x_dihedral_angle_d27.5
x_scangle_it3.02
x_scbond_it1.84
x_improper_angle_d1.55
x_mcangle_it1.49
x_angle_deg1
x_mcbond_it0.91
x_bond_d0.008
x_bond_d_na
x_bond_d_prot
x_angle_d
x_angle_d_na
x_angle_d_prot
x_angle_deg_na
x_angle_deg_prot
x_dihedral_angle_d_na
x_dihedral_angle_d_prot
x_improper_angle_d_na
x_improper_angle_d_prot
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms807
Nucleic Acid Atoms
Solvent Atoms104
Heterogen Atoms1

Software

Software
Software NamePurpose
X-PLORmodel building
X-PLORrefinement
UCSD-systemdata reduction
UCSD-systemdata scaling
X-PLORphasing