1BW0

CRYSTAL STRUCTURE OF TYROSINE AMINOTRANSFERASE FROM TRYPANOSOMA CRUZI


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
17DIALYSIS OF 2.6 MG/ML PROTEIN AGAINST 25 % (W/W) PEG 8000, 5 MM PLP, 0.1 M PHOSPHATE/CITRATE, PH 7.0, 285 K
Crystal Properties
Matthews coefficientSolvent content
2.551

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 61.6α = 90
b = 102.2β = 110.3
c = 77.9γ = 90
Symmetry
Space GroupP 1 21 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray285AREA DETECTORSIEMENS X1000COLLIMATOR1996-06-15MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1ROTATING ANODESIEMENS

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
12.51078.40.051171.72466830.17
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
2.52.64470.09661.2

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodStarting modelResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUTPDB ENTRY 1ART2.51024668126478.40.1570.214RANDOM25.19
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
7.542.74-0.76-6.75
RMS Deviations
KeyRefinement Restraint Deviation
p_transverse_tor30.7
p_staggered_tor16.6
p_planar_tor2.7
p_mcangle_it1.307
p_scangle_it1.287
p_scbond_it0.738
p_mcbond_it0.721
p_multtor_nbd0.242
p_singtor_nbd0.178
p_xyhbond_nbd0.139
RMS Deviations
KeyRefinement Restraint Deviation
p_transverse_tor30.7
p_staggered_tor16.6
p_planar_tor2.7
p_mcangle_it1.307
p_scangle_it1.287
p_scbond_it0.738
p_mcbond_it0.721
p_multtor_nbd0.242
p_singtor_nbd0.178
p_xyhbond_nbd0.139
p_chiral_restr0.081
p_angle_d0.023
p_planar_d0.02
p_plane_restr0.0143
p_bond_d0.006
p_angle_deg
p_hb_or_metal_coord
p_xhyhbond_nbd
p_orthonormal_tor
p_special_tor
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms6472
Nucleic Acid Atoms
Solvent Atoms118
Heterogen Atoms

Software

Software
Software NamePurpose
AMoREphasing
REFMACrefinement
X-GENdata reduction
CCP4data scaling