1BLU

STRUCTURE OF THE 2[4FE-4S] FERREDOXIN FROM CHROMATIUM VINOSUM


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
16.5CRYSTALS WERE GROWN AT ROOM TEMPERATURE IN 0.1M TRIS-MALEATE BUFFER, PH 6.5 CONTAINING 2.9 M AMMONIUM SULPHATE AND 0.1 M NACL
Crystal Properties
Matthews coefficientSolvent content
3.3263

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 52α = 90
b = 52β = 90
c = 77.2γ = 120
Symmetry
Space GroupP 31 2 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-rayIMAGE PLATEMARRESEARCH1993-10-19M
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONEMBL/DESY, HAMBURG BEAMLINE X11EMBL/DESY, HAMBURGX11

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
12.120970.08157178

Refinement

Statistics
Diffraction IDStructure Solution MethodStarting modelResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-WorkR-FreeMean Isotropic B
X-RAY DIFFRACTIONMR1FDX2.120717897
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
RMS Deviations
KeyRefinement Restraint Deviation
p_staggered_tor19.6
p_transverse_tor12
p_scangle_it9.5
p_scbond_it5.9
p_mcangle_it5.2
p_mcbond_it3.4
p_planar_tor3
p_multtor_nbd0.272
p_xyhbond_nbd0.212
p_chiral_restr0.211
RMS Deviations
KeyRefinement Restraint Deviation
p_staggered_tor19.6
p_transverse_tor12
p_scangle_it9.5
p_scbond_it5.9
p_mcangle_it5.2
p_mcbond_it3.4
p_planar_tor3
p_multtor_nbd0.272
p_xyhbond_nbd0.212
p_chiral_restr0.211
p_singtor_nbd0.21
p_planar_d0.05
p_angle_d0.043
p_bond_d0.021
p_plane_restr0.016
p_angle_deg
p_hb_or_metal_coord
p_xhyhbond_nbd
p_orthonormal_tor
p_special_tor
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms612
Nucleic Acid Atoms
Solvent Atoms85
Heterogen Atoms16

Software

Software
Software NamePurpose
AMoREphasing
PROLSQrefinement
DENZOdata reduction
SCALEPACKdata scaling