1BJ8

THIRD N-TERMINAL DOMAIN OF GP130, NMR, MINIMIZED AVERAGE STRUCTURE


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
1CBCA(CO)NHWATER200 mM NACL7.41 atm298
2CBCANHWATER200 mM NACL7.41 atm298
3C(CO)NHWATER200 mM NACL7.41 atm298
4HNCAWATER200 mM NACL7.41 atm298
5HBHA(CO)NHWATER200 mM NACL7.41 atm298
615N-EDITED HOHAHAWATER200 mM NACL7.41 atm298
713C-EDITED TOCSYWATER200 mM NACL7.41 atm298
815N-EDITED NOESYWATER200 mM NACL7.41 atm298
913C-EDITED NOESYWATER200 mM NACL7.41 atm298
10HNHAWATER200 mM NACL7.41 atm298
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1VarianUNITY500500
2VarianINOVA600600
3BrukerDMX600600
NMR Refinement
MethodDetailsSoftware
DISTANCE GEOMETRY, RESTRAINED MOLECULAR DYNAMICS, SIMULATED ANNEALINGTHE FINAL 22 STRUCTURES WERE CALCULATED USING A TOTAL OF 1575 RESTRAINTS. DISTANCE BOUND DRIVEN DYNAMICS WAS DONE FOR 1000 STEPS AT 1000 KELVIN, FOLLOWED BY 1000 STEPS OF SIMULATED ANNEALING TO 10 KELVIN. THE MEAN STRUCTURE WAS ENERGY MINIMIZED USING THE GROMOS PROGRAMM PACKAGE.DDD
NMR Ensemble Information
Conformer Selection CriteriaLEAST RESTRAINT VIOLATION
Conformers Calculated Total Number22
Conformers Submitted Total Number1
Additional NMR Experimental Information
DetailsTHE STRUCTURE WAS DETERMINED USING TRIPLE-RESONANCE NMR SPECTROSCOPY ON 13C, 15N-LABELED PROTEIN
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1refinementDDDSCHEEK
2structure solutionDDD