1B9K

ALPHA-ADAPTIN APPENDAGE DOMAIN, FROM CLATHRIN ADAPTOR AP2


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1620% PEG 4000, 10% ISOPROPANOL, 100MM NA CITRATE PH 6.0, 10MM DTT, 6MG/ML PROTEIN
Crystal Properties
Matthews coefficientSolvent content
2.0239

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 39.86α = 99.4
b = 40.87β = 95.29
c = 42.47γ = 113.69
Symmetry
Space GroupP 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100IMAGE PLATEMAR scanner 180 mm plate1997-09-19MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONELETTRA BEAMLINE 5.2RELETTRA5.2R

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)R Sym I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.915.55970.0880.0886.62.851805622
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)R-Sym I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
1.92970.2350.2355.32.6

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMIRTHROUGHOUT1.915.55181981444970.1720.1630.221RANDOM20
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
1.410.140.04-0.60.13-0.4
RMS Deviations
KeyRefinement Restraint Deviation
p_transverse_tor21
p_special_tor15
p_staggered_tor13
p_scangle_it6
p_scbond_it4.4
p_planar_tor4.4
p_mcangle_it3.2
p_mcbond_it2.5
p_xhyhbond_nbd0.3
p_multtor_nbd0.245
RMS Deviations
KeyRefinement Restraint Deviation
p_transverse_tor21
p_special_tor15
p_staggered_tor13
p_scangle_it6
p_scbond_it4.4
p_planar_tor4.4
p_mcangle_it3.2
p_mcbond_it2.5
p_xhyhbond_nbd0.3
p_multtor_nbd0.245
p_singtor_nbd0.18
p_chiral_restr0.123
p_xyhbond_nbd0.109
p_planar_d0.034
p_angle_d0.032
p_bond_d0.013
p_plane_restr0.01
p_angle_deg
p_hb_or_metal_coord
p_orthonormal_tor
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms1875
Nucleic Acid Atoms
Solvent Atoms302
Heterogen Atoms

Software

Software
Software NamePurpose
SHARPphasing
REFMACrefinement
MOSFLMdata reduction
CCP4data scaling
SOLOMONphasing