7K1S
The N-terminus of varicella-zoster virus glycoprotein B has a functional role in fusion.
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Viral glycoprotein ectodomain-like | 8102281 | 3001498 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Viral glycoprotein ectodomain-like | 8102281 | 3001498 | SCOP2B (2022-06-29) |
C | SCOP2 Family | Glycoprotein B-like | 8102280 | 4002622 | SCOP2 (2022-06-29) |
C | SCOP2 Superfamily | Viral glycoprotein ectodomain-like | 8102281 | 3001498 | SCOP2 (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF17416 | e7k1sA2 | A: beta barrels | X: PH domain-like | H: first barrel domain in viral glycoproteins (From Topology) | T: first barrel domain in viral glycoproteins | F: PF17416 | ECOD (1.6) |
A | PF17417 | e7k1sA1 | A: beta barrels | X: PH domain-like | H: second barrel domain in viral glycoproteins (From Topology) | T: second barrel domain in viral glycoproteins | F: PF17417 | ECOD (1.6) |
A | PF00606 | e7k1sA3 | A: beta complex topology | X: Viral glycoprotein ectodomain-like (From Topology) | H: Viral glycoprotein ectodomain-like (From Topology) | T: Viral glycoprotein ectodomain-like | F: PF00606 | ECOD (1.6) |
B | PF17416 | e7k1sB1 | A: beta barrels | X: PH domain-like | H: first barrel domain in viral glycoproteins (From Topology) | T: first barrel domain in viral glycoproteins | F: PF17416 | ECOD (1.6) |
B | PF17417 | e7k1sB3 | A: beta barrels | X: PH domain-like | H: second barrel domain in viral glycoproteins (From Topology) | T: second barrel domain in viral glycoproteins | F: PF17417 | ECOD (1.6) |
B | PF00606 | e7k1sB2 | A: beta complex topology | X: Viral glycoprotein ectodomain-like (From Topology) | H: Viral glycoprotein ectodomain-like (From Topology) | T: Viral glycoprotein ectodomain-like | F: PF00606 | ECOD (1.6) |
C | PF17416 | e7k1sC3 | A: beta barrels | X: PH domain-like | H: first barrel domain in viral glycoproteins (From Topology) | T: first barrel domain in viral glycoproteins | F: PF17416 | ECOD (1.6) |
C | PF17417 | e7k1sC2 | A: beta barrels | X: PH domain-like | H: second barrel domain in viral glycoproteins (From Topology) | T: second barrel domain in viral glycoproteins | F: PF17417 | ECOD (1.6) |
C | PF00606 | e7k1sC1 | A: beta complex topology | X: Viral glycoprotein ectodomain-like (From Topology) | H: Viral glycoprotein ectodomain-like (From Topology) | T: Viral glycoprotein ectodomain-like | F: PF00606 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00606 | Herpesvirus Glycoprotein B ectodomain (Glycoprotein_B) | Herpesvirus Glycoprotein B ectodomain | This domain corresponds to the ectodomain of glycoprotein B according to ECOD. | Domain | |
PF17416 | Herpesvirus Glycoprotein B (Glycoprot_B_PH1) | Herpesvirus Glycoprotein B | This domain has a PH-like fold. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR000234 | Herpesvirus Glycoprotein B | Family | |
IPR035381 | Herpesvirus Glycoprotein B, PH-like domain 2 | Domain | |
IPR035377 | Herpesvirus Glycoprotein B, PH-like domain 1 | Domain | |
IPR038631 | Herpesvirus Glycoprotein B, PH-like domain 2 superfamily | Homologous Superfamily |