Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ESCOP2B SuperfamilyRnp2-like8065989 3000630 SCOP2B (2022-06-29)
GSCOP2B SuperfamilyAlbA-like8091019 3000507 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
KPF04032e7c79K1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF04032ECOD (1.6)
EPF01900e7c79E1 A: a+b two layersX: Alpha-beta plaitsH: Rpp14/Pop5-like (From Topology)T: Rpp14/Pop5-likeF: PF01900ECOD (1.6)
FPF01918e7c79F1 A: a+b two layersX: IF3-likeH: AlbA-like (From Topology)T: AlbA-likeF: PF01918ECOD (1.6)
GPF12328e7c79G1 A: a+b two layersX: IF3-likeH: AlbA-like (From Topology)T: AlbA-likeF: PF12328ECOD (1.6)
HPF20976e7c79H1 A: a+b two layersX: Alpha-beta plaitsH: Rpp14/Pop5-like (From Topology)T: Rpp14/Pop5-likeF: PF20976ECOD (1.6)
IPF01876e7c79I1 A: a/b barrelsX: TIM beta/alpha-barrelH: TIM barrels (From Topology)T: TIM barrelsF: PF01876ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
G3.30.110.20 Alpha Beta 2-Layer Sandwich Translation Initiation Factor IF3 Alba-like domainCATH (utative)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF04032RNAse P Rpr2/Rpp21/SNM1 subunit domain (Rpr2)RNAse P Rpr2/Rpp21/SNM1 subunit domain- Family
PF20945Ribonuclease MRP protein subunit RMP1 (RMP1)Ribonuclease MRP protein subunit RMP1- Family
PF08170POPLD (NUC188) domain (POPLD)POPLD (NUC188) domainThis domain is found in POP1-like nucleolar proteins [1].Domain
PF06978Ribonucleases P/MRP protein subunit POP1, N-terminal (POP1_N)Ribonucleases P/MRP protein subunit POP1, N-terminalThis entry represents a conserved region approximately 150 residues long located towards the N-terminus of the POP1 subunit that is common to both the RNase MRP and RNase P ribonucleoproteins (EC:3.1.26.5) [1]. These RNA-containing enzymes generate m ...This entry represents a conserved region approximately 150 residues long located towards the N-terminus of the POP1 subunit that is common to both the RNase MRP and RNase P ribonucleoproteins (EC:3.1.26.5) [1]. These RNA-containing enzymes generate mature tRNA molecules by cleaving their 5' ends. This is a short N-terminal domain consisting of a small helical core and a long alpha-helix [2], which is enriched with positively charged residues involved in pre-tRNA substrate recognition [2].
Domain
PF08228RNase P subunit Pop3 (RNase_P_pop3)RNase P subunit Pop3- Family
PF01868Ribonuclease P/MRP, subunit p29 (RNase_P-MRP_p29)Ribonuclease P/MRP, subunit p29- Family
PF01900Rpp14/Pop5 family (RNase_P_Rpp14)Rpp14/Pop5 family- Family
PF01918Alba (Alba)Alba- Family
PF12328Rpp20 subunit of nuclear RNase MRP and P (Rpp20)Rpp20 subunit of nuclear RNase MRP and P- Family
PF20976Ribonucleases P/MRP protein subunit Pop8 (Pop8)Ribonucleases P/MRP protein subunit Pop8Pop8 is a component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends. It is also a component of Ribonuclease MRP, which cleaves pre-rRNA sequences [1]. Ribonuclease P consists of an RNA moiety and at ...Pop8 is a component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends. It is also a component of Ribonuclease MRP, which cleaves pre-rRNA sequences [1]. Ribonuclease P consists of an RNA moiety and at least 9 protein subunits including POP1, POP3, POP4, POP5, POP6, POP7, POP8, RPP1 and RPR2. Ribonuclease MRP complex consists of an RNA moiety and at least 10 protein subunits including POP1, POP3, POP4, POP5, POP6, POP7, POP8, RMP1, RPP1 and SNM1, many of which are shared with the Ribonuclease P complex [2]. Pop8 interacts with Pop5 and Rpp1 to form the Pop5-Pop8-(Rpp1)2 heterotetramer, which is part of the arm module of the p[protein hook [2].
Domain
I, J
PF01876RNase P subunit p30 (RNase_P_p30)RNase P subunit p30This protein is part of the RNase P complex that is involved in tRNA maturation [1].Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Ribonuclease MRP RNA subunit NME1---
Ribonuclease MRP protein subunit SNM1
Ribonuclease MRP protein subunit RMP1
Ribonucleases P/MRP protein subunit POP1
Ribonucleases P/MRP protein subunit POP3
RNases MRP/P 32.9 kDa subunit
Ribonuclease P/MRP protein subunit POP5
Ribonucleases P/MRP protein subunit POP6
Ribonucleases P/MRP protein subunit POP7
Ribonucleases P/MRP protein subunit POP8
I, J
Ribonuclease P/MRP protein subunit RPP1