6TIG

Structure of the N terminal domain of Bc2L-C lectin (1-131) in complex with Globo H (H-type 3) antigen


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
A [auth AAA]PF21592e6tigAAA1 A: beta sandwichesX: jelly-rollH: TNF-like (From Topology)T: TNF-likeF: PF21592ECOD (1.6)
B [auth BBB]PF21592e6tigBBB1 A: beta sandwichesX: jelly-rollH: TNF-like (From Topology)T: TNF-likeF: PF21592ECOD (1.6)
C [auth CCC]PF21592e6tigCCC1 A: beta sandwichesX: jelly-rollH: TNF-like (From Topology)T: TNF-likeF: PF21592ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A [auth AAA],
B [auth BBB],
C [auth CCC]
PF21592Bc2l-C, N-terminal domain (Bc2l-C_N)Bc2l-C, N-terminal domainThis domain is found at the N-terminal end of Lectin from Burkholderia cenocepacia (Bc2l-C) and similar bacterial sequences. Bc2l-C is a soluble lectin involved in bacterial adhesion and subsequent deadly infection to the host. It has two domains: a ...This domain is found at the N-terminal end of Lectin from Burkholderia cenocepacia (Bc2l-C) and similar bacterial sequences. Bc2l-C is a soluble lectin involved in bacterial adhesion and subsequent deadly infection to the host. It has two domains: a C-terminal domain Pfam:PF07472 and this domain, which adopts a compact jellyroll architecture composed of 11 beta-strands and a short helix. It shows specificity for fucosylated human histo-blood group epitopes H-type 1, Lewis b, and Lewis Y [1,2].
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth AAA],
B [auth BBB],
C [auth CCC]
Lectin - -