Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AF_UNCLASSIFIEDe6o6tA2 A: alpha bundlesX: Four-helical up-and-down bundleH: HEPNT: HEPN domain in CRISPR-associated protein Csx1F: F_UNCLASSIFIEDECOD (1.6)
APF22230e6o6tA1 A: a/b three-layered sandwichesX: CARF (CRISPR-associated Rossmann fold) domains (From Topology)H: CARF (CRISPR-associated Rossmann fold) domains (From Topology)T: CARF (CRISPR-associated Rossmann fold) domainsF: PF22230ECOD (1.6)
BF_UNCLASSIFIEDe6o6tB2 A: alpha bundlesX: Four-helical up-and-down bundleH: HEPNT: HEPN domain in CRISPR-associated protein Csx1F: F_UNCLASSIFIEDECOD (1.6)
BPF22230e6o6tB1 A: a/b three-layered sandwichesX: CARF (CRISPR-associated Rossmann fold) domains (From Topology)H: CARF (CRISPR-associated Rossmann fold) domains (From Topology)T: CARF (CRISPR-associated Rossmann fold) domainsF: PF22230ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B
PF09455CRISPR system endoribonuclease Csx1, HEPN domain (Csx1_HEPN)CRISPR system endoribonuclease Csx1, HEPN domainCRISPR system endoribonuclease Csx1 is a metal-independent, endoribonuclease that acts selectively on ssRNA and cleaves specifically after adenosines, as part of the type III-B CRISP-Cas system and it is homologous to Csm6 [1-3], sharing the same dom ...CRISPR system endoribonuclease Csx1 is a metal-independent, endoribonuclease that acts selectively on ssRNA and cleaves specifically after adenosines, as part of the type III-B CRISP-Cas system and it is homologous to Csm6 [1-3], sharing the same domain domain architecture consisting of a CARF domain at the N-terminal that is relatively well conserved, and a HEPN nuclease domain at the C-terminal. This entry represents the HEPN domain, which is has less conservation except for the typical R-X4-H motif [1-3].
Domain