6ITX
Structure of the C-terminal head domain of the avian adenovirus EDSV fiber
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Virus attachment protein globular domain | 8098100 | 3001376 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Virus attachment protein globular domain | 8098100 | 3001376 | SCOP2B (2022-06-29) |
C [auth D] | SCOP2 Family | Fowl adenovirus type 1 head domain-like | 8098099 | 4004935 | SCOP2 (2022-06-29) |
C [auth D] | SCOP2 Superfamily | Virus attachment protein globular domain | 8098100 | 3001376 | SCOP2 (2022-06-29) |
D [auth C] | SCOP2B Superfamily | Virus attachment protein globular domain | 8098100 | 3001376 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | Virus attachment protein globular domain | 8098100 | 3001376 | SCOP2B (2022-06-29) |
F | SCOP2B Superfamily | Virus attachment protein globular domain | 8098100 | 3001376 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | AdHead_fibreRBD | e6itxA1 | A: beta sandwiches | X: Domain in virus attachment proteins (From Topology) | H: Domain in virus attachment proteins (From Topology) | T: Domain in virus attachment proteins | F: AdHead_fibreRBD | ECOD (1.6) |
B | AdHead_fibreRBD | e6itxB1 | A: beta sandwiches | X: Domain in virus attachment proteins (From Topology) | H: Domain in virus attachment proteins (From Topology) | T: Domain in virus attachment proteins | F: AdHead_fibreRBD | ECOD (1.6) |
C [auth D] | AdHead_fibreRBD | e6itxD1 | A: beta sandwiches | X: Domain in virus attachment proteins (From Topology) | H: Domain in virus attachment proteins (From Topology) | T: Domain in virus attachment proteins | F: AdHead_fibreRBD | ECOD (1.6) |
D [auth C] | AdHead_fibreRBD | e6itxC1 | A: beta sandwiches | X: Domain in virus attachment proteins (From Topology) | H: Domain in virus attachment proteins (From Topology) | T: Domain in virus attachment proteins | F: AdHead_fibreRBD | ECOD (1.6) |
E | AdHead_fibreRBD | e6itxE1 | A: beta sandwiches | X: Domain in virus attachment proteins (From Topology) | H: Domain in virus attachment proteins (From Topology) | T: Domain in virus attachment proteins | F: AdHead_fibreRBD | ECOD (1.6) |
F | AdHead_fibreRBD | e6itxF1 | A: beta sandwiches | X: Domain in virus attachment proteins (From Topology) | H: Domain in virus attachment proteins (From Topology) | T: Domain in virus attachment proteins | F: AdHead_fibreRBD | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.60.90.30 | Mainly Beta | Sandwich | Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) | Fiber protein 1, C-terminal domain | CATH (utative) |
B | 2.60.90.30 | Mainly Beta | Sandwich | Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) | Fiber protein 1, C-terminal domain | CATH (utative) |
C [auth D] | 2.60.90.30 | Mainly Beta | Sandwich | Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) | Fiber protein 1, C-terminal domain | CATH (utative) |
D [auth C] | 2.60.90.30 | Mainly Beta | Sandwich | Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) | Fiber protein 1, C-terminal domain | CATH (utative) |
E | 2.60.90.30 | Mainly Beta | Sandwich | Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) | Fiber protein 1, C-terminal domain | CATH (utative) |
F | 2.60.90.30 | Mainly Beta | Sandwich | Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) | Fiber protein 1, C-terminal domain | CATH (utative) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF16812 | C-terminal head domain of the fowl adenovirus type 1 long fibre (AdHead_fibreRBD) | C-terminal head domain of the fowl adenovirus type 1 long fibre | AdHead_fibreRBD is a C-terminal part of the head domain of the dsDNA viruses, no RNA stage, Adenovirus. This is a globular head domain with an anti-parallel beta-sandwich fold formed by two four-stranded beta-sheets with the same overall topology as ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR009013 | Attachment protein shaft domain superfamily | Homologous Superfamily | |
IPR038486 | Fiber protein, C-terminal domain superfamily | Homologous Superfamily | |
IPR000931 | Adenovirus fibre protein | Family | |
IPR031822 | Fiber protein 1, C-terminal | Domain | |
IPR000939 | Adenoviral fibre protein, repeat/shaft region | Repeat |