6GAP

Crystal structure of the T3D reovirus sigma1 coiled coil tail and body

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AF_UNCLASSIFIEDe6gapA1 A: beta duplicates or obligate multimersX: Triple beta-spiral (From Topology)H: Triple beta-spiral (From Topology)T: Triple beta-spiralF: F_UNCLASSIFIEDECOD (1.6)
AF_UNCLASSIFIEDe6gapA2 A: alpha bundlesX: YscO-likeH: CT398 helical hairpin (From Topology)T: CT398 helical hairpinF: F_UNCLASSIFIEDECOD (1.6)
BF_UNCLASSIFIEDe6gapB2 A: beta duplicates or obligate multimersX: Triple beta-spiral (From Topology)H: Triple beta-spiral (From Topology)T: Triple beta-spiralF: F_UNCLASSIFIEDECOD (1.6)
BF_UNCLASSIFIEDe6gapB1 A: alpha bundlesX: YscO-likeH: CT398 helical hairpin (From Topology)T: CT398 helical hairpinF: F_UNCLASSIFIEDECOD (1.6)
CF_UNCLASSIFIEDe6gapC2 A: beta duplicates or obligate multimersX: Triple beta-spiral (From Topology)H: Triple beta-spiral (From Topology)T: Triple beta-spiralF: F_UNCLASSIFIEDECOD (1.6)
CF_UNCLASSIFIEDe6gapC1 A: alpha bundlesX: YscO-likeH: CT398 helical hairpin (From Topology)T: CT398 helical hairpinF: F_UNCLASSIFIEDECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C
PF01664Reovirus viral attachment protein sigma 1 (Reo_sigma1)Reovirus viral attachment protein sigma 1- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B, C
Outer capsid protein sigma-1-

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C
IPR009013Attachment protein shaft domain superfamilyHomologous Superfamily
A, B, C
IPR008982Adenovirus pIV-like, attachment domainHomologous Superfamily
A, B, C
IPR002592Viral attachment sigma 1, reoviralFamily