6BXA
Crystal structure of N-terminal fragment of Zebrafish Toll-Like Receptor 5 (TLR5) with Lamprey Variable Lymphocyte Receptor 2 (VLR2) bound
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
C | d6bxac_ | Alpha and beta proteins (a/b) | Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) | L domain-like | automated matches | automated matches | sea lamprey (Petromyzon marinus ) [TaxId: 7757 ], | SCOPe (2.08) |
D | d6bxad_ | Alpha and beta proteins (a/b) | Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) | L domain-like | automated matches | automated matches | sea lamprey (Petromyzon marinus ) [TaxId: 7757 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF11921,PF13855 | e6bxaA1 | A: beta duplicates or obligate multimers | X: Single-stranded right-handed beta-helix | H: Leucine-rich repeats (From Topology) | T: Leucine-rich repeats | F: PF11921,PF13855 | ECOD (1.6) |
B | PF11921,PF13855 | e6bxaB1 | A: beta duplicates or obligate multimers | X: Single-stranded right-handed beta-helix | H: Leucine-rich repeats (From Topology) | T: Leucine-rich repeats | F: PF11921,PF13855 | ECOD (1.6) |
C | PF01462,PF13855 | e6bxaC1 | A: beta duplicates or obligate multimers | X: Single-stranded right-handed beta-helix | H: Leucine-rich repeats (From Topology) | T: Leucine-rich repeats | F: PF01462,PF13855 | ECOD (1.6) |
D | PF01462,PF13855 | e6bxaD1 | A: beta duplicates or obligate multimers | X: Single-stranded right-handed beta-helix | H: Leucine-rich repeats (From Topology) | T: Leucine-rich repeats | F: PF01462,PF13855 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF13855 | Leucine rich repeat (LRR_8) | Leucine rich repeat | - | Repeat | |
PF13516 | Leucine Rich repeat (LRR_6) | Leucine Rich repeat | - | Repeat | |
PF11921 | Domain of unknown function (DUF3439) (DUF3439) | Domain of unknown function (DUF3439) | - | Family | |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR032675 | Leucine-rich repeat domain superfamily | Homologous Superfamily | |
IPR000372 | Leucine-rich repeat N-terminal domain | Domain | |
IPR024592 | Variable lymphocyte receptor, C-terminal | Domain | |
IPR001611 | Leucine-rich repeat | Repeat | |
IPR003591 | Leucine-rich repeat, typical subtype | Repeat | |
IPR000157 | Toll/interleukin-1 receptor homology (TIR) domain | Domain | |
IPR001611 | Leucine-rich repeat | Repeat | |
IPR003591 | Leucine-rich repeat, typical subtype | Repeat | |
IPR017241 | Toll-like receptor | Family | |
IPR032675 | Leucine-rich repeat domain superfamily | Homologous Superfamily | |
IPR035897 | Toll/interleukin-1 receptor homology (TIR) domain superfamily | Homologous Superfamily | |
IPR000483 | Cysteine-rich flanking region, C-terminal | Domain |