5WWS
Crystal structure of human NSun6/tRNA/SAM
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
C [auth A] | PUA | e5wwsA2 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: PUA domain | F: PUA | ECOD (1.6) |
C [auth A] | UNK_F_TYPE | e5wwsA3 | A: a+b two layers | X: Alpha-beta plaits | H: NOL1/NOP2/sun N-terminal ferredoxin-like domain (From Topology) | T: NOL1/NOP2/sun N-terminal ferredoxin-like domain | F: UNK_F_TYPE | ECOD (1.6) |
C [auth A] | Methyltr_RsmB-F_1 | e5wwsA1 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: S-adenosyl-L-methionine-dependent methyltransferases | F: Methyltr_RsmB-F_1 | ECOD (1.6) |
D [auth B] | PUA | e5wwsB2 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: PUA domain | F: PUA | ECOD (1.6) |
D [auth B] | UNK_F_TYPE | e5wwsB3 | A: a+b two layers | X: Alpha-beta plaits | H: NOL1/NOP2/sun N-terminal ferredoxin-like domain (From Topology) | T: NOL1/NOP2/sun N-terminal ferredoxin-like domain | F: UNK_F_TYPE | ECOD (1.6) |
D [auth B] | Methyltr_RsmB-F_1 | e5wwsB1 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: S-adenosyl-L-methionine-dependent methyltransferases | F: Methyltr_RsmB-F_1 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
C [auth A], D [auth B] | PF01189 | 16S rRNA methyltransferase RsmB/F (Methyltr_RsmB-F) | 16S rRNA methyltransferase RsmB/F | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
C [auth A], D [auth B] | IPR015947 | PUA-like superfamily | Homologous Superfamily |
C [auth A], D [auth B] | IPR001678 | SAM-dependent methyltransferase RsmB-F/NOP2-type domain | Domain |
C [auth A], D [auth B] | IPR029063 | S-adenosyl-L-methionine-dependent methyltransferase superfamily | Homologous Superfamily |
C [auth A], D [auth B] | IPR023267 | RNA (C5-cytosine) methyltransferase | Family |
C [auth A], D [auth B] | IPR036974 | PUA domain superfamily | Homologous Superfamily |
C [auth A], D [auth B] | IPR018314 | Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site | Conserved Site |
C [auth A], D [auth B] | IPR049560 | SAM-dependent methyltransferase RsmB-F/NOP2-type, catalytic core | Domain |