5V5E

Room temperature (280K) crystal structure of Kaposi's sarcoma-associated herpesvirus protease in complex with allosteric inhibitor (compound 733)

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APeptidase_S21e5v5eA1 A: beta barrelsX: Herpes virus serine proteinase, assemblin (From Topology)H: Herpes virus serine proteinase, assemblin (From Topology)T: Herpes virus serine proteinase, assemblinF: Peptidase_S21ECOD (1.6)
BPeptidase_S21e5v5eB1 A: beta barrelsX: Herpes virus serine proteinase, assemblin (From Topology)H: Herpes virus serine proteinase, assemblin (From Topology)T: Herpes virus serine proteinase, assemblinF: Peptidase_S21ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A3.20.16.10 Alpha Beta Alpha-Beta Barrel Serine Protease, Human Cytomegalovirus Protease Chain ACATH (4.3.0)
B3.20.16.10 Alpha Beta Alpha-Beta Barrel Serine Protease, Human Cytomegalovirus Protease Chain ACATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B
PF00716Assemblin (Peptidase family S21) (Peptidase_S21)Assemblin (Peptidase family S21)- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B
ORF 17

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B
IPR035443Herpesvirus protease superfamilyHomologous Superfamily
A, B
IPR001847Peptidase S21Family