5TVP
SUMO2 bound to Mouse Tdp2 catalytic domain with a 5'-phosphorylated DNA ternary complex
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth I] | PF03372 | e5tvpI1 | A: a+b four layers | X: Carbon-nitrogen hydrolase-like | H: DNase I-like (From Topology) | T: DNase I-like | F: PF03372 | ECOD (1.6) |
C [auth O] | PF03372 | e5tvpO1 | A: a+b four layers | X: Carbon-nitrogen hydrolase-like | H: DNase I-like (From Topology) | T: DNase I-like | F: PF03372 | ECOD (1.6) |
F [auth E] | PF03372 | e5tvpE1 | A: a+b four layers | X: Carbon-nitrogen hydrolase-like | H: DNase I-like (From Topology) | T: DNase I-like | F: PF03372 | ECOD (1.6) |
H [auth G] | PF03372 | e5tvpG1 | A: a+b four layers | X: Carbon-nitrogen hydrolase-like | H: DNase I-like (From Topology) | T: DNase I-like | F: PF03372 | ECOD (1.6) |
J [auth B] | PF03372 | e5tvpB1 | A: a+b four layers | X: Carbon-nitrogen hydrolase-like | H: DNase I-like (From Topology) | T: DNase I-like | F: PF03372 | ECOD (1.6) |
L [auth A] | PF03372 | e5tvpA1 | A: a+b four layers | X: Carbon-nitrogen hydrolase-like | H: DNase I-like (From Topology) | T: DNase I-like | F: PF03372 | ECOD (1.6) |
N [auth K] | PF03372 | e5tvpK1 | A: a+b four layers | X: Carbon-nitrogen hydrolase-like | H: DNase I-like (From Topology) | T: DNase I-like | F: PF03372 | ECOD (1.6) |
P [auth M] | PF03372 | e5tvpM1 | A: a+b four layers | X: Carbon-nitrogen hydrolase-like | H: DNase I-like (From Topology) | T: DNase I-like | F: PF03372 | ECOD (1.6) |
E [auth Q] | PF11976 | e5tvpQ1 | A: a+b two layers | X: beta-Grasp | H: Ubiquitin-related | T: Ubiquitin-like | F: PF11976 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A [auth I] | 3.60.10.10 | Alpha Beta | 4-Layer Sandwich | Deoxyribonuclease I | Chain A | CATH (4.3.0) |
C [auth O] | 3.60.10.10 | Alpha Beta | 4-Layer Sandwich | Deoxyribonuclease I | Chain A | CATH (4.3.0) |
F [auth E] | 3.60.10.10 | Alpha Beta | 4-Layer Sandwich | Deoxyribonuclease I | Chain A | CATH (4.3.0) |
H [auth G] | 3.60.10.10 | Alpha Beta | 4-Layer Sandwich | Deoxyribonuclease I | Chain A | CATH (4.3.0) |
J [auth B] | 3.60.10.10 | Alpha Beta | 4-Layer Sandwich | Deoxyribonuclease I | Chain A | CATH (4.3.0) |
L [auth A] | 3.60.10.10 | Alpha Beta | 4-Layer Sandwich | Deoxyribonuclease I | Chain A | CATH (4.3.0) |
N [auth K] | 3.60.10.10 | Alpha Beta | 4-Layer Sandwich | Deoxyribonuclease I | Chain A | CATH (4.3.0) |
P [auth M] | 3.60.10.10 | Alpha Beta | 4-Layer Sandwich | Deoxyribonuclease I | Chain A | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF03372 | Endonuclease/Exonuclease/phosphatase family (Exo_endo_phos) | Endonuclease/Exonuclease/phosphatase family | This large family of proteins includes magnesium dependent endonucleases and a large number of phosphatases involved in intracellular signalling [1]. This family includes: AP endonuclease proteins EC:4.2.99.18 e.g Swiss:P27695, DNase I proteins EC:3. ... | Domain | |
E [auth Q] | PF11976 | Ubiquitin-2 like Rad60 SUMO-like (Rad60-SLD) | Ubiquitin-2 like Rad60 SUMO-like | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR005135 | Endonuclease/exonuclease/phosphatase | Domain | |
IPR036691 | Endonuclease/exonuclease/phosphatase superfamily | Homologous Superfamily | |
E [auth Q] | IPR000626 | Ubiquitin-like domain | Domain |
E [auth Q] | IPR029071 | Ubiquitin-like domain superfamily | Homologous Superfamily |
E [auth Q] | IPR022617 | Rad60/SUMO-like domain | Domain |