5OY9
VSV G CR3
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Viral glycoprotein ectodomain-like | 8033687 | 3001498 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B [auth D] | PF00057 | e5oy9D1 | A: few secondary structure elements | X: EGF-like | H: LDL receptor-like module (From Topology) | T: LDL receptor-like module | F: PF00057 | ECOD (1.6) |
A | PF00974 | e5oy9A3 | A: beta barrels | X: PH domain-like | H: first barrel domain in viral glycoproteins (From Topology) | T: first barrel domain in viral glycoproteins | F: PF00974 | ECOD (1.6) |
A | PF00974 | e5oy9A1 | A: beta barrels | X: PH domain-like | H: second barrel domain in viral glycoproteins (From Topology) | T: second barrel domain in viral glycoproteins | F: PF00974 | ECOD (1.6) |
A | PF00974 | e5oy9A2 | A: beta complex topology | X: Viral glycoprotein ectodomain-like (From Topology) | H: Viral glycoprotein ectodomain-like (From Topology) | T: Viral glycoprotein ectodomain-like | F: PF00974 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
B [auth D] | PF00057 | Low-density lipoprotein receptor domain class A (Ldl_recept_a) | Low-density lipoprotein receptor domain class A | - | Repeat |
PF00974 | Rhabdovirus spike glycoprotein (Rhabdo_glycop) | Rhabdovirus spike glycoprotein | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
B [auth D] | IPR018097 | EGF-like calcium-binding, conserved site | Conserved Site |
B [auth D] | IPR036055 | LDL receptor-like superfamily | Homologous Superfamily |
B [auth D] | IPR049883 | NOTCH1 EGF-like calcium-binding domain | Domain |
B [auth D] | IPR000033 | LDLR class B repeat | Repeat |
B [auth D] | IPR001881 | EGF-like calcium-binding domain | Domain |
B [auth D] | IPR023415 | Low-density lipoprotein (LDL) receptor class A, conserved site | Conserved Site |
B [auth D] | IPR011042 | Six-bladed beta-propeller, TolB-like | Homologous Superfamily |
B [auth D] | IPR002172 | Low-density lipoprotein (LDL) receptor class A repeat | Repeat |
B [auth D] | IPR000742 | EGF-like domain | Domain |
B [auth D] | IPR009030 | Growth factor receptor cysteine-rich domain superfamily | Homologous Superfamily |
B [auth D] | IPR000152 | EGF-type aspartate/asparagine hydroxylation site | PTM |
IPR001903 | Rhabdovirus glycoprotein | Family |