5KTF

Structure of the C-terminal transmembrane domain of scavenger receptor BI (SR-BI)

External Resource: Annotation

Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Membrane Protein Annotation: OPM
Membrane Protein Annotation: PDBTM
Membrane Protein Annotation: mpstruc

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A	PF01130	CD36 family (CD36)	CD36 family	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	Scavenger receptor class B member 1	amide binding amyloid-beta binding binding peptide binding apolipoprotein binding protein binding apolipoprotein A-I binding cargo receptor activity scavenger receptor activity lipoprotein particle binding protein-containing complex binding protein-lipid complex binding high-density lipoprotein particle binding lipoprotein particle receptor activity amide binding amyloid-beta binding binding peptide binding apolipoprotein binding protein binding apolipoprotein A-I binding cargo receptor activity scavenger receptor activity lipoprotein particle binding protein-containing complex binding protein-lipid complex binding high-density lipoprotein particle binding lipoprotein particle receptor activity high-density lipoprotein particle receptor activity identical protein binding modified amino acid binding phospholipid binding lipid binding phosphatidylserine binding lipopolysaccharide binding carbohydrate derivative binding low-density lipoprotein particle binding molecular transducer activity pattern recognition receptor activity signaling receptor activity lipopolysaccharide immune receptor activity	sterol catabolic process alcohol catabolic process catabolic process lipid catabolic process organic hydroxy compound metabolic process sterol metabolic process steroid metabolic process cholesterol metabolic process alcohol metabolic process primary metabolic process organic cyclic compound catabolic process cholesterol catabolic process organic cyclic compound metabolic process secondary alcohol metabolic process organic substance metabolic process sterol catabolic process alcohol catabolic process catabolic process lipid catabolic process organic hydroxy compound metabolic process sterol metabolic process steroid metabolic process cholesterol metabolic process alcohol metabolic process primary metabolic process organic cyclic compound catabolic process cholesterol catabolic process organic cyclic compound metabolic process secondary alcohol metabolic process organic substance metabolic process steroid catabolic process organic hydroxy compound catabolic process metabolic process small molecule metabolic process small molecule catabolic process organic substance catabolic process lipid metabolic process import into cell transport establishment of localization vesicle-mediated transport phagocytosis, recognition localization phagocytosis cellular process cell recognition apoptotic cell clearance recognition of apoptotic cell endocytosis organic substance transport reverse cholesterol transport lipid localization lipid transport organic hydroxy compound transport macromolecule localization cholesterol transport sterol transport phospholipid transport organophosphate ester transport chemical homeostasis homeostatic process triglyceride homeostasis acylglycerol homeostasis lipid homeostasis epithelium migration multicellular organismal process tissue migration endothelial cell migration ameboidal-type cell migration blood vessel endothelial cell migration epithelial cell migration cell migration cell motility regulation of biological process plasma lipoprotein particle clearance biological regulation regulation of plasma lipoprotein particle levels transmembrane transport vitamin transport vitamin transmembrane transport regulation of localization regulation of cellular process regulation of cellular component organization regulation of transport regulation of phagocytosis regulation of vesicle-mediated transport cellular component organization cellular component organization or biogenesis regulation of endocytosis cholesterol efflux cholesterol import regulation of hormone levels lipid biosynthetic process androgen metabolic process hormone metabolic process androgen biosynthetic process biosynthetic process organic cyclic compound biosynthetic process organic substance biosynthetic process regulation of biological quality steroid biosynthetic process hormone biosynthetic process steroid hormone biosynthetic process response to organic substance biological process involved in interspecies interaction between organisms response to stimulus detection of external biotic stimulus response to lipid response to other organism detection of lipopolysaccharide response to oxygen-containing compound response to external stimulus detection of molecule of bacterial origin detection of biotic stimulus response to lipopolysaccharide response to biotic stimulus detection of stimulus response to chemical response to bacterium detection of chemical stimulus response to external biotic stimulus response to molecule of bacterial origin cell population proliferation endothelial cell proliferation epithelial cell proliferation terpenoid transport tetraterpenoid transport carotenoid transport isoprenoid transport sterol homeostasis cholesterol homeostasis neutral lipid metabolic process neutral lipid biosynthetic process regulation of triglyceride metabolic process cellular biosynthetic process positive regulation of triglyceride metabolic process regulation of lipid metabolic process positive regulation of biological process positive regulation of cellular metabolic process acylglycerol biosynthetic process regulation of primary metabolic process positive regulation of metabolic process positive regulation of biosynthetic process triglyceride metabolic process triglyceride biosynthetic process positive regulation of lipid metabolic process positive regulation of cellular process regulation of biosynthetic process cellular metabolic process regulation of cellular metabolic process regulation of triglyceride biosynthetic process positive regulation of triglyceride biosynthetic process regulation of cellular biosynthetic process glycerolipid biosynthetic process positive regulation of lipid biosynthetic process cellular lipid metabolic process glycerolipid metabolic process regulation of lipid biosynthetic process acylglycerol metabolic process regulation of metabolic process positive regulation of cellular biosynthetic process cholesterol storage lipid storage positive regulation of lipid localization maintenance of location regulation of lipid storage regulation of lipid localization positive regulation of cholesterol storage regulation of cholesterol storage positive regulation of lipid storage adhesion of symbiont to host biological process involved in interaction with host biological process involved in symbiotic interaction high-density lipoprotein particle clearance plasma lipoprotein particle organization protein-containing complex organization protein-containing complex remodeling protein-lipid complex organization plasma lipoprotein particle remodeling high-density lipoprotein particle remodeling protein-lipid complex remodeling lipopolysaccharide transport carbohydrate derivative transport intestinal lipid absorption system process digestion intestinal absorption digestive system process low-density lipoprotein particle clearance phospholipid catabolic process glycerophospholipid metabolic process glycerolipid catabolic process organophosphate catabolic process cellular lipid catabolic process cellular catabolic process phospholipid metabolic process regulation of phosphate metabolic process phosphate-containing compound metabolic process phosphatidylcholine metabolic process phosphorus metabolic process organonitrogen compound catabolic process regulation of phospholipid catabolic process organonitrogen compound metabolic process regulation of phosphatidylcholine metabolic process regulation of phospholipid metabolic process regulation of catabolic process regulation of lipid catabolic process phosphatidylcholine catabolic process organophosphate metabolic process regulation of phosphatidylcholine catabolic process regulation of cellular catabolic process regulation of phosphorus metabolic process glycerophospholipid catabolic process	membrane cellular anatomical entity plasma membrane plasma membrane bounded cell projection cell periphery cell projection actin-based cell projection plasma membrane region microvillus microvillus membrane cell projection membrane intracellular anatomical structure cytoplasm cell surface membrane cellular anatomical entity plasma membrane plasma membrane bounded cell projection cell periphery cell projection actin-based cell projection plasma membrane region microvillus microvillus membrane cell projection membrane intracellular anatomical structure cytoplasm cell surface membrane microdomain membrane raft plasma membrane raft caveola membrane-bounded organelle intracellular organelle organelle intracellular membrane-bounded organelle lytic vacuole vacuole lysosome

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR002159	CD36 family	Family
A	IPR005428	CD36/scavenger receptor class B member 1	Family

Membrane Protein Annotation: OPM OPM Database Homepage

Chains	External Link	Type	Class	Superfamily	Family
A	OPM				CD36 glycoprotein

Membrane Protein Annotation: PDBTM PDBTM Database Homepage

Chains	External Link	Comment
A	PDBTM	Annotated as membrane protein by PDBTM

Membrane Protein Annotation: mpstruc mpstruc Database Homepage

Chains	Resource Link	Group	Subgroup	Protein
A	mpstruc	TRANSMEMBRANE PROTEINS: ALPHA-HELICAL	High-Density Lipoprotein (HDL) Receptors	C-terminal transmembrane domain of scavenger receptor BI (SR-BI)

RCSB PDB Core Operations are funded by the National Science Foundation (DBI-1832184), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.